PK03611.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK03611.1 T31633_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK03611.1 RRM 78 146
PK03611.1 RRM 173 242

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000709988 Malus x domestica MDP0000709988 N 0.821
mgf005844m Mimulus guttatus mgf005844m N 0.780
mgf011517m Mimulus guttatus mgf011517m N 0.780
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.771
mgf018937m Mimulus guttatus mgf018937m N 0.768
29900.m001607 Ricinus communis 29900.m001607 N 0.764
B9I1M7_POPTR Populus trichocarpa POPTR_0011s07480 N 0.763
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 0.757
cassava28996.valid.m1 Manihot esculenta cassava28996.valid.m1 N 0.757
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 0.757
B9H2J4_POPTR Populus trichocarpa POPTR_0004s05450 N 0.748
LjT18N19.10.nd Lotus japonicus LjT18N19.10.nd N 0.743
Glyma07g32660.1 Glycine max Glyma07g32660.1 N 0.736
MDP0000250519 Malus x domestica MDP0000250519 N 0.736
ppa008108m Prunus persica ppa008108m N 0.736
MDP0000596919 Malus x domestica MDP0000596919 N 0.736
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.736
SB03G027820 Sorghum bicolor Sb03g027820 N 0.736
GRMZM2G049866 Zea mays GRMZM2G049866 N 0.736
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.736
MDP0000410930 Malus x domestica MDP0000410930 N 0.729
ppa005857m Prunus persica ppa005857m N 0.729
MDP0000575061 Malus x domestica MDP0000575061 N 0.729
Glyma02g15810.1 Glycine max Glyma02g15810.1 N 0.729
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.729
BRADI2G43460 Brachypodium distachyon BRADI2G43460 N 0.729
GRMZM2G117715 Zea mays GRMZM2G117715 N 0.729
LOC_Os01g42820 Oryza sativa LOC_Os01g42820 N 0.721
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.721
Cucsa.273510 Cucumis sativus Cucsa.273510 N 0.714
PK28408.1 Cannabis sativa PK28408.1 N 0.707
Glyma12g19050.1 Glycine max Glyma12g19050.1 N 0.700
chr3.CM0282.340.nc Lotus japonicus chr3.CM0282.340.nc N 0.700