29900.m001607 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 29900.m001607 T48704_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
29900.m001607 RRM 77 146
29900.m001607 RRM 173 242

Links

Other RRM family RBPs
Other Ricinus communis RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.900
cassava28996.valid.m1 Manihot esculenta cassava28996.valid.m1 N 0.893
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 0.893
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 0.893
B9I1M7_POPTR Populus trichocarpa POPTR_0011s07480 N 0.807
B9H2J4_POPTR Populus trichocarpa POPTR_0004s05450 N 0.800
PK03611.1 Cannabis sativa PK03611.1 N 0.764
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.736
LjT18N19.10.nd Lotus japonicus LjT18N19.10.nd N 0.714
MDP0000250519 Malus x domestica MDP0000250519 N 0.714
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.714
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.707
MDP0000596919 Malus x domestica MDP0000596919 N 0.707
ppa005857m Prunus persica ppa005857m N 0.707
Glyma07g32660.1 Glycine max Glyma07g32660.1 N 0.707
mgf018937m Mimulus guttatus mgf018937m N 0.704
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.700