POPTR_0011s14150 (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0011s14150 T45618_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s14150.1 RRM 72 141
POPTR_0011s14150.1 RRM 165 236

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000224315 Malus x domestica MDP0000224315 N 0.804
PK15181.1 Cannabis sativa PK15181.1 N 0.790
GSVIVG00037634001 Vitis vinifera GSVIVG00037634001 N 0.734
Sb07g005360 Sorghum bicolor Sb07g005360 N 0.720
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.713
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.706