GRMZM2G426591 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G426591 T54236_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G426591_P01 RRM 123 193
GRMZM2G426591_P01 RRM 213 284
GRMZM2G426591_P01 RRM 317 381
GRMZM2G426591_P02 RRM 123 193
GRMZM2G426591_P02 RRM 213 284
GRMZM2G426591_P03 RRM 123 193
GRMZM2G426591_P03 RRM 213 284
GRMZM2G426591_P03 RRM 317 381
GRMZM2G426591_P04 RRM 113 183
GRMZM2G426591_P04 RRM 203 274
GRMZM2G426591_P04 RRM 307 371

Links

Other RRM family RBPs
Other Zea mays RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb07g005360 Sorghum bicolor Sb07g005360 N 0.979
GRMZM2G058098 Zea mays GRMZM2G058098 N 0.895
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.880
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.875
BRADI3G15180 Brachypodium distachyon BRADI3G15180 N 0.865
SB06G029180 Sorghum bicolor Sb06g029180 N 0.865
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.861
GRMZM2G012628 Zea mays GRMZM2G012628 N 0.861
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.861
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.846
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.764
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.760
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.760
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.760
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.755
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.755
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.750
PK10695.1 Cannabis sativa PK10695.1 I 0.740
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.736
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.736
MDP0000294628 Malus x domestica MDP0000294628 I 0.736
mgf010468m Mimulus guttatus mgf010468m I 0.731
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.726
29842.m003612 Ricinus communis 29842.m003612 N 0.721
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.716
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.716
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.716
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.716
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.716
PK15181.1 Cannabis sativa PK15181.1 N 0.713
mgf014417m Mimulus guttatus mgf014417m N 0.712
ppa006617m Prunus persica ppa006617m N 0.712
MDP0000223369 Malus x domestica MDP0000223369 N 0.707
MDP0000614064 Malus x domestica MDP0000614064 N 0.707
MDP0000224315 Malus x domestica MDP0000224315 N 0.706
POPTR_0011s14150 Populus trichocarpa POPTR_0011s14150 N 0.706
Cucsa.085240 Cucumis sativus Cucsa.085240 N 0.706
ppa006577m Prunus persica ppa006577m I 0.702
PDK_20s1343381g001 Phoenix dactylifera PDK_20s1343381g001 N 0.702