Cucsa.085240 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.085240 T49541_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.085240.1 RRM 102 172
Cucsa.085240.1 RRM 195 266

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava1153.valid.m1 Manihot esculenta cassava1153.valid.m1 N 0.811
cassava3547.m1 Manihot esculenta cassava3547.m1 N 0.748
mgf014170m Mimulus guttatus mgf014170m N 0.741
PK15181.1 Cannabis sativa PK15181.1 N 0.727
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.727
Sb07g005360 Sorghum bicolor Sb07g005360 N 0.720
BGIOSIBCE011803 Oryza indica BGIOSIBCE011803 N 0.713
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.706