e_gw1.25.349.1 (Lottia gigantea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.25.349.1 T49898_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		0.797
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.25.349.1 RRM 100 178

Links

Other RRM family RBPs
Other Lottia gigantea RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_960014 Capitella teleta estExt_fgenesh1_pg.C_960014 I 0.835
CNOT4 Monodelphis domestica ENSMODG00000014068 I 0.785
Cnot4 Mus musculus ENSMUSG00000038784 I 0.785
CNOT4 Macaca mulatta ENSMMUG00000016181 I 0.785
CNOT4 Ornithorhynchus anatinus ENSOANG00000005006 I 0.785
CNOT4 Meleagris gallopavo ENSMGAG00000011788 I 0.785
Q5ZJC9_CHICK Gallus gallus ENSGALG00000011682 I 0.785
CNOT4 Loxodonta africana ENSLAFG00000000709 I 0.785
CNOT4 Oryctolagus cuniculus ENSOCUG00000013448 I 0.785
CNOT4 Microcebus murinus ENSMICG00000001667 I 0.785
ENSPPYG00000018026 Pongo pygmaeus ENSPPYG00000018026 I 0.785
CNOT4 Taeniopygia guttata ENSTGUG00000009161 I 0.785
CNOT4 Tarsius syrichta ENSTSYG00000000893 I 0.785
CNOT4 Tursiops truncatus ENSTTRG00000005122 I 0.785
cnot4 Xenopus tropicalis ENSXETG00000010594 I 0.785
CNOT4 Tupaia belangeri ENSTBEG00000002202 I 0.785
CNOT4 Sorex araneus ENSSARG00000009778 I 0.785
CNOT4 Pan troglodytes ENSPTRG00000019727 I 0.785
CNOT4 Pteropus vampyrus ENSPVAG00000004905 I 0.785
Cnot4 Rattus norvegicus ENSRNOG00000010795 I 0.785
CNOT4 Gasterosteus aculeatus ENSGACG00000004276 I 0.785
CNOT4 Gorilla gorilla ENSGGOG00000000142 I 0.785
Q5BIS2_BOVIN Bos taurus ENSBTAG00000017919 I 0.785
AAH44088 Xenopus laevis AAH44088 I 0.785
CNOT4 Anolis carolinensis ENSACAG00000011154 I 0.785
Ame_R016242 Ailuropoda melanoleuca Ame_R016242 I 0.785
CNOT4 Homo sapiens ENSG00000080802 D 0.785
CNOT4 Choloepus hoffmanni ENSCHOG00000010412 I 0.785
CNOT4 Canis familiaris ENSCAFG00000003223 I 0.785
CNOT4 Equus caballus ENSECAG00000020262 I 0.785
CNOT4 Callithrix jacchus ENSCJAG00000012532 I 0.785
zgc:63566 Danio rerio ENSDARG00000007639 I 0.785
CNOT4 Cavia porcellus ENSCPOG00000011526 I 0.785
CNOT4 Danio rerio ENSDARG00000007045 I 0.785
XP_780160.2 Strongylocentrotus purpuratus XP_780160.2 I 0.772
CNOT4 Tetraodon nigroviridis ENSTNIG00000016000 I 0.772
XP_001179227.1 Strongylocentrotus purpuratus XP_001179227.1 I 0.772
CNOT4 Takifugu rubripes ENSTRUG00000016861 I 0.772
nasonia_NCBI_hmm502784 Nasonia vitripennis nasonia_NCBI_hmm502784 I 0.772
111136 Helobdella robusta 111136 I 0.772
CNOT4 Oryzias latipes ENSORLG00000003727 I 0.772
NCBI_GNO_5300025 Daphnia pulex NCBI_GNO_5300025 I 0.747
amel4_ncbi_hmm18698 Apis mellifera amel4_ncbi_hmm18698 I 0.722
amel4_ncbi_hmm16010 Tribolium castaneum amel4_ncbi_hmm16010 I 0.722
amel4_ncbi_hmm16010 Apis mellifera amel4_ncbi_hmm16010 I 0.722
DGIL_AUG5s3525g11t1 Acyrtosiphon pisum DGIL_AUG5s3525g11t1 I 0.709
PHUM247100 Pediculus humanus PHUM247100 I 0.709