gwEuk.6.623.1 (Ostreococcus lucimarinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gwEuk.6.623.1 T53469_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gwEuk.6.623.1 RRM 29 99

Links

Other RRM family RBPs
Other Ostreococcus lucimarinus RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EuGene.0600010284 Ostreococcus RCC809 EuGene.0600010284 N 0.915
e_gw1.06.00.460.1 Ostreococcus tauri e_gw1.06.00.460.1 N 0.831
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.789
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.761
EuGene.0000060244 Micromonas pusilla EuGene.0000060244 N 0.761
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.746
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.746
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.746
e_gw1.31.212.1 Physcomitrella patens e_gw1.31.212.1 N 0.732
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.732
SPPG_02323 Spizellomyces punctatus SPPG_02323 I 0.732
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.718
estExt_Genewise1.C_420029 Chlorella NC64A estExt_Genewise1.C_420029 N 0.718
PK01699.1 Cannabis sativa PK01699.1 N 0.704
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.704
BGIOSIBCE017506 Oryza indica BGIOSIBCE017506 N 0.704
LOC_Os05g04850 Oryza sativa LOC_Os05g04850 N 0.704
e_gw1.23.492.1 Selaginella moellendorfii e_gw1.23.492.1 N 0.704