estExt_gwp.C_760137 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_gwp.C_760137 T51597_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp.C_760137 RRM 18 87
estExt_gwp.C_760137 RRM 208 273

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPH3 Canis familiaris ENSCAFG00000013619 N 0.772
ENSEEUG00000013364 Erinaceus europaeus ENSEEUG00000013364 N 0.768
HNRNPH1 Macaca mulatta ENSMMUG00000010843 N 0.768
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.768
HNRNPH1 Procavia capensis ENSPCAG00000006715 N 0.768
HNRNPH3 Ornithorhynchus anatinus ENSOANG00000002260 N 0.759
HNRNPH3 Sorex araneus ENSSARG00000013863 N 0.754
AAH82630 Xenopus laevis AAH82630 N 0.754
hnrnph3 Xenopus tropicalis ENSXETG00000023567 N 0.754
HNRNPH3 Ochotona princeps ENSOPRG00000014850 N 0.746
Hnrnph3 Mus musculus ENSMUSG00000020069 N 0.746
HNRNPH3 Monodelphis domestica ENSMODG00000017283 N 0.746
ENSPPYG00000002397 Pongo pygmaeus ENSPPYG00000002397 N 0.746
HNRNPH3 Oryctolagus cuniculus ENSOCUG00000004443 N 0.746
Hnrnph3 Rattus norvegicus ENSRNOG00000026849 N 0.746
HNRNPH3 Tursiops truncatus ENSTTRG00000013322 N 0.746
HNRNPH3 Vicugna pacos ENSVPAG00000011814 N 0.746
HNRNPH3 Spermophilus tridecemlineatus ENSSTOG00000011676 N 0.746
HNRNPH3 Sus scrofa ENSSSCG00000010238 N 0.746
HNRNPH3 Pteropus vampyrus ENSPVAG00000008037 N 0.746
HNRNPH3 Pan troglodytes ENSPTRG00000002553 N 0.746
HNRNPH3 Myotis lucifugus ENSMLUG00000000143 N 0.746
HNRNPH3 Cavia porcellus ENSCPOG00000006397 N 0.746
LOC100063127 Equus caballus ENSECAG00000007190 N 0.746
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.746
HNRNPH3 Bos taurus ENSBTAG00000014316 N 0.746
HNRNPH3 Anolis carolinensis ENSACAG00000010365 N 0.746
HNRNPH3 Macaca mulatta ENSMMUG00000009792 N 0.746
HNRNPH3 Homo sapiens ENSG00000096746 N 0.746
HNRNPH3 Loxodonta africana ENSLAFG00000012955 N 0.746
Ame_R001515 Ailuropoda melanoleuca Ame_R001515 N 0.746
HNRNPH3 Gorilla gorilla ENSGGOG00000025378 N 0.746
HNRNPH3 Taeniopygia guttata ENSTGUG00000003609 N 0.739
HNRNPH3 Macropus eugenii ENSMEUG00000013139 N 0.739
LOC100407750 Callithrix jacchus ENSCJAG00000022707 N 0.739
Q5F3D2_CHICK Gallus gallus ENSGALG00000003947 N 0.739
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.732
HNRNPH3 Procavia capensis ENSPCAG00000000111 N 0.717
HNRNPH3 Erinaceus europaeus ENSEEUG00000005025 N 0.710
ENSMICG00000016899 Microcebus murinus ENSMICG00000016899 N 0.710