CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMICG00000016899
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000016899
T38593_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000015391
RRM
14
83
VRLRGLPFGCTKEENRQIFSGLEIVPNGITLPVDSESKITGEAFVQFASQELAEKALGKHKERIGHRYIE
ENSMICP00000015391
RRM
193
260
VHMRGLPYKATENDIYSFFSPLKPVRVQIEIGPDGRVTGEADVEFATHEEAVASMSKDRANMQHRYIE
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPF
Callithrix jacchus
ENSCJAG00000016238
I
0.935
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.862
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.862
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.862
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.862
ENSBTAG00000020513
Bos taurus
ENSBTAG00000020513
N
0.814
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.783
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.783
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.783
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.783
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.783
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.783
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.783
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.783
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.783
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.783
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.783
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.783
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.783
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.783
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.783
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.783
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.783
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.783
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.783
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.783
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.783
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.783
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.783
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.783
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.783
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.775
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.775
HNRNPH3
Ochotona princeps
ENSOPRG00000014850
N
0.775
AAH82630
Xenopus laevis
AAH82630
N
0.775
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.775
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.775
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.768
HNRNPH3
Procavia capensis
ENSPCAG00000000111
N
0.754
HNRNPH3
Erinaceus europaeus
ENSEEUG00000005025
N
0.746
HNRNPH3
Meleagris gallopavo
ENSMGAG00000003795
N
0.732
hnrnph1l
Danio rerio
ENSDARG00000005551
I
0.719
HNRNPH1
Ochotona princeps
ENSOPRG00000003513
N
0.717
estExt_gwp.C_760137
Branchiostoma floridae
estExt_gwp.C_760137
N
0.710