CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
HNRNPH3
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000014850
T40043_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000013561
RRM
18
87
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSOPRP00000013561
RRM
197
264
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHQYIE
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.993
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.993
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.993
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.993
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.993
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.993
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.993
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.993
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.993
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.993
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.993
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.993
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.993
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.993
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.993
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.993
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.993
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.993
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.993
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.993
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.993
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.986
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.986
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.986
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.986
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.978
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.978
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.978
HNRNPH3
Procavia capensis
ENSPCAG00000000111
N
0.964
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.964
HNRNPH3
Erinaceus europaeus
ENSEEUG00000005025
N
0.949
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.942
HNRNPH3
Meleagris gallopavo
ENSMGAG00000003795
N
0.935
AAH82630
Xenopus laevis
AAH82630
N
0.935
HNRNPH3
Tupaia belangeri
ENSTBEG00000006114
N
0.906
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.877
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.877
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.877
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.877
HNRNPF
Callithrix jacchus
ENSCJAG00000016238
I
0.833
HNRNPH3
Choloepus hoffmanni
ENSCHOG00000012954
N
0.819
ENSMICG00000016899
Microcebus murinus
ENSMICG00000016899
N
0.775
estExt_gwp.C_760137
Branchiostoma floridae
estExt_gwp.C_760137
N
0.746
hnrnph1l
Danio rerio
ENSDARG00000005551
I
0.727
HNRNPH3
Dasypus novemcinctus
ENSDNOG00000004881
N
0.717
ENSBTAG00000020513
Bos taurus
ENSBTAG00000020513
N
0.714
HNRNPH1
Ochotona princeps
ENSOPRG00000003513
N
0.710