HNRNPF (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000016238 T35632_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.838
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000029898 RRM 13 84
ENSCJAP00000029898 RRM 113 182
ENSCJAP00000029898 RRM 291 358
ENSCJAP00000043110 RRM 13 84
ENSCJAP00000043110 RRM 113 182
ENSCJAP00000043110 RRM 291 358
ENSCJAP00000044803 RRM 13 84
ENSCJAP00000044803 RRM 113 182
ENSCJAP00000044803 RRM 291 358
ENSCJAP00000045358 RRM 13 84
ENSCJAP00000045358 RRM 113 182
ENSCJAP00000045358 RRM 291 358
ENSCJAP00000045915 RRM 36 105
ENSCJAP00000045915 RRM 214 281
ENSCJAP00000048558 RRM 13 84
ENSCJAP00000048558 RRM 113 182
ENSCJAP00000048558 RRM 291 358

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.995
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.995
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.995
HNRNPF Homo sapiens ENSG00000169813 I 0.995
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.995
HNRNPF Sorex araneus ENSSARG00000010059 I 0.990
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.990
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.990
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.986
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.986
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.986
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.986
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.981
LOC100050002 Equus caballus ENSECAG00000003229 I 0.981
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.981
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.976
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.976
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.976
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.971
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.962
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.952
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.952
ENSMICG00000016899 Microcebus murinus ENSMICG00000016899 N 0.935
HNRNPH1 Macaca mulatta ENSMMUG00000010843 N 0.920
HNRNPH1 Procavia capensis ENSPCAG00000006715 N 0.920
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.920
ENSEEUG00000013364 Erinaceus europaeus ENSEEUG00000013364 N 0.920
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.910
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.876
ENSBTAG00000020513 Bos taurus ENSBTAG00000020513 N 0.871
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.867
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.867
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.867
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.867
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.867
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.867
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.867
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.867
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.867
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.867
HNRNPH1 Homo sapiens ENSG00000169045 I 0.867
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.867
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.867
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.867
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.867
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.862
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.862
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.852
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.852
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.852
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.852
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.843
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.843
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.843
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.843
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.843
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.843
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.843
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.843
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.843
LOC100057665 Equus caballus ENSECAG00000023575 I 0.843
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.843
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.843
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.843
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.843
HNRNPH3 Sus scrofa ENSSSCG00000010238 N 0.841
HNRNPH3 Homo sapiens ENSG00000096746 N 0.841
Hnrnph3 Rattus norvegicus ENSRNOG00000026849 N 0.841
HNRNPH3 Loxodonta africana ENSLAFG00000012955 N 0.841
HNRNPH3 Gorilla gorilla ENSGGOG00000025378 N 0.841
HNRNPH3 Tursiops truncatus ENSTTRG00000013322 N 0.841
HNRNPH3 Vicugna pacos ENSVPAG00000011814 N 0.841
HNRNPH3 Bos taurus ENSBTAG00000014316 N 0.841
HNRNPH3 Canis familiaris ENSCAFG00000013619 N 0.841
LOC100063127 Equus caballus ENSECAG00000007190 N 0.841
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.841
Ame_R001515 Ailuropoda melanoleuca Ame_R001515 N 0.841
HNRNPH3 Pteropus vampyrus ENSPVAG00000008037 N 0.841
HNRNPH3 Cavia porcellus ENSCPOG00000006397 N 0.841
HNRNPH3 Spermophilus tridecemlineatus ENSSTOG00000011676 N 0.841
ENSPPYG00000002397 Pongo pygmaeus ENSPPYG00000002397 N 0.841
HNRNPH3 Ornithorhynchus anatinus ENSOANG00000002260 N 0.841
Hnrnph3 Mus musculus ENSMUSG00000020069 N 0.841
HNRNPH3 Monodelphis domestica ENSMODG00000017283 N 0.841
HNRNPH3 Oryctolagus cuniculus ENSOCUG00000004443 N 0.841
HNRNPH3 Macaca mulatta ENSMMUG00000009792 N 0.841
HNRNPH3 Myotis lucifugus ENSMLUG00000000143 N 0.841
HNRNPH3 Pan troglodytes ENSPTRG00000002553 N 0.841
HNRNPH2 Homo sapiens ENSG00000126945 D 0.838
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.838
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.838
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.838
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.838
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.838
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.838
hnrnph3 Xenopus tropicalis ENSXETG00000023567 N 0.833
HNRNPH3 Taeniopygia guttata ENSTGUG00000003609 N 0.833
HNRNPH3 Macropus eugenii ENSMEUG00000013139 N 0.833
HNRNPH3 Anolis carolinensis ENSACAG00000010365 N 0.833
Q5F3D2_CHICK Gallus gallus ENSGALG00000003947 N 0.833
HNRNPH3 Ochotona princeps ENSOPRG00000014850 N 0.833
HNRNPH3 Sorex araneus ENSSARG00000013863 N 0.833
hnrnph1l Danio rerio ENSDARG00000005551 I 0.829
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.829
LOC100407750 Callithrix jacchus ENSCJAG00000022707 N 0.826
AAH82630 Xenopus laevis AAH82630 N 0.826
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.824
AAH77770 Xenopus laevis AAH77770 I 0.819
AAI10708 Xenopus laevis AAI10708 I 0.819
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.814
HNRNPH3 Procavia capensis ENSPCAG00000000111 N 0.812
AAH70969 Xenopus laevis AAH70969 I 0.810
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.810
HNRNPH3 Erinaceus europaeus ENSEEUG00000005025 N 0.804
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.795
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.795
HNRNPH3 Meleagris gallopavo ENSMGAG00000003795 N 0.790
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.786
LOC100067495 Equus caballus ENSECAG00000014429 I 0.786
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.786
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.781
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.776
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.767
HNRNPF Felis catus ENSFCAG00000006794 N 0.767
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.762
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.762
HNRNPH1 Ochotona princeps ENSOPRG00000003513 N 0.754
HNRNPH3 Tupaia belangeri ENSTBEG00000006114 N 0.746
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.738
estExt_gwp.C_760137 Branchiostoma floridae estExt_gwp.C_760137 N 0.732
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.729
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.724
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.724
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.719
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.719