gw.267.29.1 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw.267.29.1 T53422_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw.267.29.1 RRM 6 71

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
srsf3a Danio rerio ENSDARG00000025397 I 0.773
SRSF3 Oryctolagus cuniculus ENSOCUG00000006684 I 0.758
SRSF3 Ochotona princeps ENSOPRG00000006006 I 0.758
Srsf3 Mus musculus ENSMUSG00000071172 I 0.758
SRSF3 Oryzias latipes ENSORLG00000000292 I 0.758
SRSF3 Monodelphis domestica ENSMODG00000013539 I 0.758
ENSLAFG00000018193 Loxodonta africana ENSLAFG00000018193 I 0.758
SRSF3 Meleagris gallopavo ENSMGAG00000002503 I 0.758
SRSF3 Microcebus murinus ENSMICG00000004674 I 0.758
SRSF3 Macaca mulatta ENSMMUG00000014306 I 0.758
SRSF3 Oryzias latipes ENSORLG00000020054 I 0.758
ENSPPYG00000016548 Pongo pygmaeus ENSPPYG00000016548 I 0.758
SRSF3 Tetraodon nigroviridis ENSTNIG00000001003 I 0.758
SRSF3 Tursiops truncatus ENSTTRG00000013447 I 0.758
SRSF3 Vicugna pacos ENSVPAG00000005481 I 0.758
srsf3 Xenopus tropicalis ENSXETG00000001701 I 0.758
SFRS3 Taeniopygia guttata ENSTGUG00000000928 I 0.758
SRSF3 Tupaia belangeri ENSTBEG00000012272 I 0.758
XR_022443.1 Pan troglodytes ENSPTRG00000018106 I 0.758
SRSF3 Pteropus vampyrus ENSPVAG00000014621 I 0.758
Sfrs3 Rattus norvegicus ENSRNOG00000000520 I 0.758
SRSF3 Spermophilus tridecemlineatus ENSSTOG00000014280 I 0.758
Ame_R002060 Ailuropoda melanoleuca Ame_R002060 I 0.758
SRSF3 Gorilla gorilla ENSGGOG00000017186 I 0.758
SFRS3 Gallus gallus ENSGALG00000000533 I 0.758
SRSF3 Cavia porcellus ENSCPOG00000003722 I 0.758
srsf3b Danio rerio ENSDARG00000059360 I 0.758
Q9XSU6_CANFA Canis familiaris ENSCAFG00000001414 I 0.758
SFRS3_BOVIN Bos taurus ENSBTAG00000040006 I 0.758
nasonia_NCBI_hmm124154 Nasonia vitripennis nasonia_NCBI_hmm124154 I 0.758
SRSF3 Anolis carolinensis ENSACAG00000016637 I 0.758
ENSDORG00000012283 Dipodomys ordii ENSDORG00000012283 I 0.758
LOC100408013 Callithrix jacchus ENSCJAG00000016062 I 0.758
SRSF3 Homo sapiens ENSG00000112081 I 0.758
SRSF3 Echinops telfairi ENSETEG00000010117 I 0.758
SRSF3 Felis catus ENSFCAG00000001084 I 0.758
LOC100053336 Equus caballus ENSECAG00000018741 I 0.758
SRSF3 Gasterosteus aculeatus ENSGACG00000001473 N 0.742
SRSF3 Tetraodon nigroviridis ENSTNIG00000014643 N 0.742
Gm12355 Mus musculus ENSMUSG00000078134 I 0.742
AAH46661 Xenopus laevis AAH46661 I 0.742
SRSF3 Sus scrofa ENSSSCG00000001564 I 0.742
SRSF3 Gasterosteus aculeatus ENSGACG00000001042 N 0.742
amel4_ncbi_hmm63829 Apis mellifera amel4_ncbi_hmm63829 I 0.727
nasonia_NCBI_hmm78264 Nasonia vitripennis nasonia_NCBI_hmm78264 I 0.727
amel4_ncbi_hmm65494 Apis mellifera amel4_ncbi_hmm65494 I 0.727
ENSCING00000011663 Ciona intestinalis ENSCING00000011663 I 0.712
ENSLAFG00000026731 Loxodonta africana ENSLAFG00000026731 N 0.712
AAEL001356 Aedes aegypti AAEL001356 I 0.712
AGAP007325 Anopheles gambiae AGAP007325 I 0.712