NCBI_GNO_7700035 (Daphnia pulex)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 NCBI_GNO_7700035 T53834_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
NCBI_GNO_7700035 RRM 302 372

Links

Other RRM family RBPs
Other Daphnia pulex RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.789
GG11323 Drosophila erecta FBgn0103624 N 0.732
GH19115 Drosophila grimshawi FBgn0126582 N 0.732
GF16243 Drosophila ananassae FBgn0093265 N 0.732
GI23570 Drosophila mojavensis FBgn0146296 N 0.732
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.732
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.732
SAFB2 Sorex araneus ENSSARG00000000649 N 0.732
GL13631 Drosophila persimilis FBgn0151236 N 0.732
CG6995 Drosophila melanogaster FBgn0039229 N 0.732
GM26630 Drosophila sechellia FBgn0181483 N 0.732
GA26852-RA Drosophila pseudoobscura FBgn0248225 N 0.732
PHUM451590 Pediculus humanus PHUM451590 N 0.732
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.732
GE23518 Drosophila yakuba FBgn0240697 N 0.732
GK14110 Drosophila willistoni FBgn0216116 N 0.732
GD21133 Drosophila simulans FBgn0192585 N 0.732
GJ23544 Drosophila virilis FBgn0210641 N 0.732
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.732
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.732
CPIJ012814 Culex quinquefasciatus CPIJ012814 N 0.732
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.732
SAFB2 Gallus gallus ENSGALG00000001948 N 0.732
CpipJ_CPIJ012814 Culex pipiens CpipJ_CPIJ012814 N 0.732
LOC100064922 Equus caballus ENSECAG00000018978 N 0.718
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.718
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.718
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.718
nasonia_NCBI_hmm598374 Nasonia vitripennis nasonia_NCBI_hmm598374 N 0.718
AAEL001352 Aedes aegypti AAEL001352 N 0.718
SAFB2 Bos taurus ENSBTAG00000001790 N 0.718
SAFB2 Homo sapiens ENSG00000130254 N 0.718
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.718
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.718
Safb2 Mus musculus ENSMUSG00000042625 N 0.718
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.718
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.718
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.718
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.718
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.718
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.718
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.718
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.718
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.718
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.718
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.704
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.704
SAFB2 Felis catus ENSFCAG00000011834 N 0.704
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.704
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.704
safb Danio rerio ENSDARG00000020467 N 0.704
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.704