CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL001352
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL001352
T32312_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL001352-PA
RRM
267
337
LWVSGLSSLTRATDLKLIFSKYGKVIGAKVVTNTRTPGTRCYGYVTMASAKDATECITHLHRTELHGRMIS
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
94 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ012814
Culex pipiens
CpipJ_CPIJ012814
N
0.986
CPIJ012814
Culex quinquefasciatus
CPIJ012814
N
0.986
AGAP001298
Anopheles gambiae
AGAP001298
N
0.930
GI23570
Drosophila mojavensis
FBgn0146296
N
0.831
GH19115
Drosophila grimshawi
FBgn0126582
N
0.831
GF16243
Drosophila ananassae
FBgn0093265
N
0.831
CG6995
Drosophila melanogaster
FBgn0039229
N
0.831
GL13631
Drosophila persimilis
FBgn0151236
N
0.831
GG11323
Drosophila erecta
FBgn0103624
N
0.831
GJ23544
Drosophila virilis
FBgn0210641
N
0.831
GA26852-RA
Drosophila pseudoobscura
FBgn0248225
N
0.831
amel4_ncbi_hmm13354
Apis mellifera
amel4_ncbi_hmm13354
N
0.831
GE23518
Drosophila yakuba
FBgn0240697
N
0.831
GK14110
Drosophila willistoni
FBgn0216116
N
0.831
GD21133
Drosophila simulans
FBgn0192585
N
0.831
GM26630
Drosophila sechellia
FBgn0181483
N
0.831
SAFB2
Oryctolagus cuniculus
ENSOCUG00000001592
N
0.817
Safb2
Dipodomys ordii
ENSDORG00000016199
N
0.803
PHUM451590
Pediculus humanus
PHUM451590
N
0.803
safb
Danio rerio
ENSDARG00000020467
N
0.803
SAFB2
Cavia porcellus
ENSCPOG00000011394
N
0.803
nasonia_NCBI_hmm598374
Nasonia vitripennis
nasonia_NCBI_hmm598374
N
0.803
estExt_fgenesh2_pg.C_3630023
Branchiostoma floridae
estExt_fgenesh2_pg.C_3630023
N
0.803
estExt_fgenesh2_pg.C_4200008
Branchiostoma floridae
estExt_fgenesh2_pg.C_4200008
N
0.803
SAFB2
Procavia capensis
ENSPCAG00000006352
N
0.789
ENSOANG00000013644
Ornithorhynchus anatinus
ENSOANG00000013644
N
0.789
SAFB2
Monodelphis domestica
ENSMODG00000001178
N
0.789
ENSPPYG00000009427
Pongo pygmaeus
ENSPPYG00000009427
N
0.789
SAFB2
Bos taurus
ENSBTAG00000001790
N
0.789
ENSSSCG00000013523
Sus scrofa
ENSSSCG00000013523
N
0.789
SAFB2
Tursiops truncatus
ENSTTRG00000013585
N
0.789
SAFB2
Callithrix jacchus
ENSCJAG00000017205
N
0.789
ENSTNIG00000015470
Tetraodon nigroviridis
ENSTNIG00000015470
N
0.789
SAFB2
Spermophilus tridecemlineatus
ENSSTOG00000002758
N
0.789
SAFB2
Sorex araneus
ENSSARG00000000649
N
0.789
SAFB2
Macaca mulatta
ENSMMUG00000017968
N
0.789
SAFB2
Pan troglodytes
ENSPTRG00000010334
N
0.789
SAFB2
Otolemur garnettii
ENSOGAG00000006855
N
0.789
SAFB2
Loxodonta africana
ENSLAFG00000003836
N
0.789
SAFB2
Echinops telfairi
ENSETEG00000016756
N
0.789
SAFB2
Gorilla gorilla
ENSGGOG00000015093
N
0.789
SAFB2
Homo sapiens
ENSG00000130254
N
0.789
ENSACAG00000016893
Anolis carolinensis
ENSACAG00000016893
N
0.789
LOC100064922
Equus caballus
ENSECAG00000018978
N
0.789
SAFB2
Myotis lucifugus
ENSMLUG00000001050
N
0.789
SAFB2
Gallus gallus
ENSGALG00000001948
N
0.775
SAFB2
Felis catus
ENSFCAG00000011834
N
0.775
SAFB-1
Taeniopygia guttata
ENSTGUG00000000489
N
0.775
SAFB
Takifugu rubripes
ENSTRUG00000003567
N
0.775
SAFB
Cavia porcellus
ENSCPOG00000026322
N
0.775
SAFB
Loxodonta africana
ENSLAFG00000003840
N
0.775
SAFB2
Canis familiaris
ENSCAFG00000018814
N
0.775
ENSMGAG00000001051
Meleagris gallopavo
ENSMGAG00000001051
N
0.775
Safb2
Mus musculus
ENSMUSG00000042625
N
0.775
SAFB
Tarsius syrichta
ENSTSYG00000001851
N
0.761
SAFB
Tursiops truncatus
ENSTTRG00000013588
N
0.761
SAFB
Vicugna pacos
ENSVPAG00000012043
N
0.761
SAFB
Dasypus novemcinctus
ENSDNOG00000015746
N
0.761
LOC100064953
Equus caballus
ENSECAG00000018659
N
0.761
A7E314_BOVIN
Bos taurus
ENSBTAG00000035585
N
0.761
SAFB
Canis familiaris
ENSCAFG00000018803
N
0.761
ENSBTAG00000007875
Bos taurus
ENSBTAG00000007875
N
0.761
SAFB
Echinops telfairi
ENSETEG00000018679
N
0.761
SAFB
Callithrix jacchus
ENSCJAG00000017081
N
0.761
SAFB
Sorex araneus
ENSSARG00000010475
N
0.761
SAFB
Oryctolagus cuniculus
ENSOCUG00000014628
N
0.761
SAFB2
Macropus eugenii
ENSMEUG00000002456
N
0.761
Ame_R016388
Ailuropoda melanoleuca
Ame_R016388
N
0.761
Ame_R016389
Ailuropoda melanoleuca
Ame_R016389
N
0.761
SAFB
Macaca mulatta
ENSMMUG00000017970
N
0.761
SAFB
Microcebus murinus
ENSMICG00000008739
N
0.761
SAFB
Oryzias latipes
ENSORLG00000016989
N
0.761
SAFB
Gorilla gorilla
ENSGGOG00000015109
N
0.761
SAFB
Gasterosteus aculeatus
ENSGACG00000011385
N
0.761
SAFB
Homo sapiens
ENSG00000160633
N
0.761
SAFB
Myotis lucifugus
ENSMLUG00000001081
N
0.761
SAFB
Pteropus vampyrus
ENSPVAG00000004913
N
0.761
ENSPPYG00000009428
Pongo pygmaeus
ENSPPYG00000009428
N
0.761
Safb
Dipodomys ordii
ENSDORG00000016200
N
0.761
SAFB
Felis catus
ENSFCAG00000011835
N
0.761
fgenesh1_pm.C_scaffold_151000005
Capitella teleta
fgenesh1_pm.C_scaffold_151000005
N
0.746
estExt_fgenesh2_pg.C_sca_50258
Lottia gigantea
estExt_fgenesh2_pg.C_sca_50258
N
0.746
SAFB
Pan troglodytes
ENSPTRG00000010335
N
0.746
Safb
Mus musculus
ENSMUSG00000071054
N
0.746
SAFB2
Gallus gallus
ENSGALG00000013365
N
0.746
SAFB
Ochotona princeps
ENSOPRG00000011561
N
0.746
SAFB-2
Taeniopygia guttata
ENSTGUG00000000502
N
0.746
ENSMGAG00000001101
Meleagris gallopavo
ENSMGAG00000001101
N
0.746
ENSMODG00000001236
Monodelphis domestica
ENSMODG00000001236
N
0.732
LOC787645
Bos taurus
ENSBTAG00000035584
N
0.732
NCBI_GNO_7700035
Daphnia pulex
NCBI_GNO_7700035
N
0.718
DGIL_AUG5s7140g4t1
Acyrtosiphon pisum
DGIL_AUG5s7140g4t1
N
0.718
ENSACAG00000016928
Anolis carolinensis
ENSACAG00000016928
N
0.704
DGIL_AUG5s8592g2t1
Acyrtosiphon pisum
DGIL_AUG5s8592g2t1
N
0.704