GRMZM2G012302 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G012302 T54003_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G012302_P01 RRM 270 335
GRMZM2G012302_P01 RRM 355 420
GRMZM2G012302_P01 RRM 824 896
GRMZM2G012302_P02 RRM 399 471
GRMZM2G012302_P03 RRM 218 290
GRMZM2G012302_P04 RRM 270 335
GRMZM2G012302_P04 RRM 355 420
GRMZM2G012302_P04 RRM 824 896

Links

Other RRM family RBPs
Other Zea mays RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB04G021130 Sorghum bicolor Sb04g021130 N 0.956
41833.m000036 Ricinus communis 41833.m000036 N 0.918
PDK_20s1670651g002 Phoenix dactylifera PDK_20s1670651g002 N 0.904
BRADI3G44380 Brachypodium distachyon BRADI3G44380 N 0.863
LOC_Os02g31290 Oryza sativa LOC_Os02g31290 N 0.859
BGIOSIBCE007174 Oryza indica BGIOSIBCE007174 N 0.859
PK15886.1 Cannabis sativa PK15886.1 N 0.820
GSVIVG00001086001 Vitis vinifera GSVIVG00001086001 N 0.820
GSVIVG00021379001 Vitis vinifera GSVIVG00021379001 N 0.815
mgf000415m Mimulus guttatus mgf000415m N 0.810
GSVIVG00008646001 Vitis vinifera GSVIVG00008646001 N 0.810
mgf015667m Mimulus guttatus mgf015667m N 0.810
e_gw1.271.39.1 Physcomitrella patens e_gw1.271.39.1 N 0.805
cassava42353.valid.m1 Manihot esculenta cassava42353.valid.m1 N 0.805
cassava42355.valid.m1 Manihot esculenta cassava42355.valid.m1 N 0.805
PK24656.1 Cannabis sativa PK24656.1 N 0.805
cassava6429.valid.m1 Manihot esculenta cassava6429.valid.m1 N 0.805
PK25465.1 Cannabis sativa PK25465.1 N 0.805
cassava44897.m1 Manihot esculenta cassava44897.m1 N 0.805
Glyma08g42230.1 Glycine max Glyma08g42230.1 N 0.805
Glyma18g12730.1 Glycine max Glyma18g12730.1 N 0.805
mgf005765m Mimulus guttatus mgf005765m N 0.805
ppa001327m Prunus persica ppa001327m N 0.805
e_gw1.12.24.1 Selaginella moellendorfii e_gw1.12.24.1 N 0.805
cassava42354.valid.m1 Manihot esculenta cassava42354.valid.m1 N 0.805
cassava42352.valid.m1 Manihot esculenta cassava42352.valid.m1 N 0.805
mgf014747m Mimulus guttatus mgf014747m N 0.800
ppa001307m Prunus persica ppa001307m N 0.800
28350.m000106 Ricinus communis 28350.m000106 N 0.800
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.795
Cucsa.349210 Cucumis sativus Cucsa.349210 N 0.795
chr6.CM0037.1500.nc Lotus japonicus chr6.CM0037.1500.nc N 0.795
Glyma15g23420.1 Glycine max Glyma15g23420.1 N 0.795
29693.m002077 Ricinus communis 29693.m002077 N 0.790
SB10G000350 Sorghum bicolor Sb10g000350 N 0.790
estExt_fgenesh2_pg.C_120305 Selaginella moellendorfii estExt_fgenesh2_pg.C_120305 N 0.790
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.785
B9GT36_POPTR Populus trichocarpa POPTR_0002s06070 N 0.785
estExt_gwp_gw1.C_780034 Physcomitrella patens estExt_gwp_gw1.C_780034 N 0.785
e_gw1.78.82.1 Physcomitrella patens e_gw1.78.82.1 N 0.785
B9H813_POPTR Populus trichocarpa POPTR_0005s22370 N 0.785
Medtr2g056620 Medicago truncatula Medtr2g056620 N 0.785
GRMZM2G004455 Zea mays GRMZM2G004455 N 0.785
Glyma09g11630.1 Glycine max Glyma09g11630.1 N 0.780
GRMZM2G154229 Zea mays GRMZM2G154229 N 0.780
ML5 Arabidopsis thaliana AT1G29400-TAIR-G N 0.780
30147.m014409 Ricinus communis 30147.m014409 N 0.780
BRADI1G52280 Brachypodium distachyon BRADI1G52280 N 0.776
cassava12910.valid.m1 Manihot esculenta cassava12910.valid.m1 N 0.776
XM_002893514.1 Arabidopsis lyrata Al_scaffold_0001_2998 N 0.776
ppa000845m Prunus persica ppa000845m N 0.776
BGIOSIBCE008451 Oryza indica BGIOSIBCE008451 N 0.771
LOC_Os02g48790 Oryza sativa LOC_Os02g48790 N 0.771
B9GMT5_POPTR Populus trichocarpa POPTR_0001s13030 N 0.766
B9I403_POPTR Populus trichocarpa POPTR_0012s10900 N 0.761
ppa000997m Prunus persica ppa000997m N 0.741
cassava13647.valid.m1 Manihot esculenta cassava13647.valid.m1 N 0.741
cassava13648.valid.m1 Manihot esculenta cassava13648.valid.m1 N 0.741
mgf023970m Mimulus guttatus mgf023970m N 0.734
B9GZ23_POPTR Populus trichocarpa POPTR_0003s16110 N 0.732
PK19379.1 Cannabis sativa PK19379.1 N 0.727
BRADI3G10967 Brachypodium distachyon BRADI3G10967 N 0.727
BRADI5G08580 Brachypodium distachyon BRADI5G08580 N 0.717
Glyma08g01040.1 Glycine max Glyma08g01040.1 N 0.717
SB06G014670 Sorghum bicolor Sb06g014670 N 0.712
GRMZM2G451716 Zea mays GRMZM2G451716 N 0.712