CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A7TR62_VANPO
(
Vanderwaltozyma polyspora
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
A7TR62_VANPO
T55361_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
A7TR62
RRM
97
167
IYVSRLPHGFHERELSKYFSQFGDLKVVRLARNKKTGKSRHYGFVEFVNKDDAKVAHESMDNYLLLGHLLK
Links
Other
RRM
family RBPs
Other
Vanderwaltozyma polyspora
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SAKL0E10604g
Lachancea kluyveri
SAKL0E10604g
N
0.845
Skud_Contig1428.4
Saccharomyces kudriavzevii
Skud_Contig1428.4
N
0.831
NOP15
Saccharomyces cerevisiae
YNL110C
N
0.831
18449_YNL110C
Saccharomyces mikatae
18449_YNL110C
N
0.831
18916_YNL110C
Saccharomyces paradoxus
18916_YNL110C
N
0.831
Kwal_8458
Kluyveromyces waltii
Kwal_8458
N
0.817
KLTH0D09262g
Kluyveromyces thermotolerans
KLTH0D09262g
N
0.817
KLLA0F23650g
Kluyveromyces lactis
KLLA0F23650g
N
0.803
CAGL0L03806g
Candida glabrata
CAGL0L03806g
N
0.803
ZYRO0B09790g
Zygosaccharomyces rouxii
ZYRO0B09790g
N
0.789
AFL224W
Ashbya gossypii
AFL224W
N
0.789
Scas_Contig666.11
Saccharomyces castellii
Scas_Contig666.11
N
0.789