CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZYRO0B09790g
(
Zygosaccharomyces rouxii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ZYRO0B09790g
T59371_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZYRO0B09790g
RRM
71
141
VFVSRLPHGFQEKELSKYFSQFGDLKDARLARNKKTGNTRHYGFIEFVNKDDAKVAQETMNNYLLMGHLIQ
Links
Other
RRM
family RBPs
Other
Zygosaccharomyces rouxii
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
18916_YNL110C
Saccharomyces paradoxus
18916_YNL110C
N
0.817
18449_YNL110C
Saccharomyces mikatae
18449_YNL110C
N
0.817
Skud_Contig1428.4
Saccharomyces kudriavzevii
Skud_Contig1428.4
N
0.817
NOP15
Saccharomyces cerevisiae
YNL110C
N
0.817
SAKL0E10604g
Lachancea kluyveri
SAKL0E10604g
N
0.789
A7TR62_VANPO
Vanderwaltozyma polyspora
A7TR62_VANPO
N
0.789
Scas_Contig666.11
Saccharomyces castellii
Scas_Contig666.11
N
0.789
KLTH0D09262g
Kluyveromyces thermotolerans
KLTH0D09262g
N
0.775
AFL224W
Ashbya gossypii
AFL224W
N
0.775
Kwal_8458
Kluyveromyces waltii
Kwal_8458
N
0.775
KLLA0F23650g
Kluyveromyces lactis
KLLA0F23650g
N
0.761
CAGL0L03806g
Candida glabrata
CAGL0L03806g
N
0.761