KLLA0B00979g (Kluyveromyces lactis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 KLLA0B00979g T57030_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Npl3
M278_0.6 		Saccharomyces cerevisiae Sequence logo not available ACAUACA RIP-chip
Cook et al.(2011)
252_15703440.1 		0.748
Npl3
M277_0.6 		Saccharomyces cerevisiae Sequence logo not available UAUAUAA RIP-chip
Cook et al.(2011)
252_15703440 		0.748
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
KLLA0B00979g RRM 54 116
KLLA0B00979g RRM 129 196

Links

Other RRM family RBPs
Other Kluyveromyces lactis RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZYRO0D12892g Zygosaccharomyces rouxii ZYRO0D12892g I 0.779
CAGL0H04763g Candida glabrata CAGL0H04763g I 0.763
SAKL0G05258g Lachancea kluyveri SAKL0G05258g I 0.763
KLTH0G04114g Kluyveromyces thermotolerans KLTH0G04114g I 0.748
5654_YDR432W Saccharomyces paradoxus 5654_YDR432W I 0.748
Kwal_18572 Kluyveromyces waltii Kwal_18572 I 0.748
Npl3 Saccharomyces cerevisiae YDR432W D 0.748
Scas_Contig717.41 Saccharomyces castellii Scas_Contig717.41 I 0.740
5166_YDR432W Saccharomyces mikatae 5166_YDR432W I 0.733
ADR183C Ashbya gossypii ADR183C N 0.733
A7TFW1_VANPO Vanderwaltozyma polyspora A7TFW1_VANPO I 0.733
5461_YDR432W Saccharomyces bayanus 5461_YDR432W I 0.733