LjT41H24.70.nd (Lotus japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LjT41H24.70.nd T57292_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjT41H24.70.nd RRM 9 76
LjT41H24.70.nd RRM 115 159

Links

Other RRM family RBPs
Other Lotus japonicus RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr3g122850 Medicago truncatula Medtr3g122850 N 0.773
chr2.CM0249.1120.nc Lotus japonicus chr2.CM0249.1120.nc N 0.773
Glyma04g40740.1 Glycine max Glyma04g40740.1 N 0.765
Glyma06g14060.1 Glycine max Glyma06g14060.1 N 0.765
B9IDH4_POPTR Populus trichocarpa POPTR_0015s00690 N 0.727
mgf014175m Mimulus guttatus mgf014175m N 0.720
mgf000052m Mimulus guttatus mgf000052m N 0.720
mgf011321m Mimulus guttatus mgf011321m N 0.720
cassava17475.valid.m1 Manihot esculenta cassava17475.valid.m1 N 0.712
At-SR34a Arabidopsis thaliana AT3G49430-TAIR-G N 0.712
XM_002875918.1 Arabidopsis lyrata scaffold_501926.1 N 0.712
29827.m002610 Ricinus communis 29827.m002610 N 0.712
cassava17474.valid.m1 Manihot esculenta cassava17474.valid.m1 N 0.712
GSVIVG00038636001 Vitis vinifera GSVIVG00038636001 N 0.705
ppa017674m Prunus persica ppa017674m N 0.705