ppa001609m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa001609m T58323_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa001609m RRM 1 40
ppa001609m RRM 260 329
ppa001609m RRM 455 519
ppa001609m RRM 576 651
ppa001609m RRM 675 743

Links

Other RRM family RBPs
Other Prunus persica RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00012163001 Vitis vinifera GSVIVG00012163001 N 0.841
MDP0000289531 Malus x domestica MDP0000289531 N 0.831
B9GY53_POPTR Populus trichocarpa POPTR_0003s14940 N 0.813
mgf002385m Mimulus guttatus mgf002385m N 0.763
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.761
XM_002869927.1 Arabidopsis lyrata Al_scaffold_0007_2200 N 0.733
Glyma13g09970.1 Glycine max Glyma13g09970.1 N 0.722
mgf010702m Mimulus guttatus mgf010702m N 0.701
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.701
mgf006636m Mimulus guttatus mgf006636m N 0.701