PDK_20s1621251g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1621251g001 T58203_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1621251g001 RRM 18 77
PDK_20s1621251g001 RRM 107 149

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PDK_20s1559771g001 Phoenix dactylifera PDK_20s1559771g001 N 0.733
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.731
POPTR_0012s02890 Populus trichocarpa POPTR_0012s02890 N 0.720
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.708
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.707
chr3.LjT02L14.110.nd Lotus japonicus chr3.LjT02L14.110.nd N 0.703
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.701
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.701
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.700