PDK_20s1742611g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1742611g001 T58227_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1742611g001 RRM 33 101

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PDK_20s1615461g006 Phoenix dactylifera PDK_20s1615461g006 N 0.870
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.746
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.732
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.718
mgf012875m Mimulus guttatus mgf012875m N 0.718
mgf016144m Mimulus guttatus mgf016144m N 0.718
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.718
mgf014059m Mimulus guttatus mgf014059m N 0.718
MDP0000635271 Malus x domestica MDP0000635271 N 0.704
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.704
SB08G015580 Sorghum bicolor Sb08g015580 N 0.704
30138.m003973 Ricinus communis 30138.m003973 N 0.704
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.704
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.704