CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Choloepus hoffmanni
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSCHOG00000013323
T61981_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000011820
YTH
1263
1341
LVFSIQGSRHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQXXXXXX
Links
Other
YTH
family RBPs
Other
Choloepus hoffmanni
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R012491
Ailuropoda melanoleuca
Ame_R012491
N
0.886
YTHDC2
Callithrix jacchus
ENSCJAG00000016598
N
0.789
YTHDC2
Bos taurus
ENSBTAG00000014099
N
0.789
ENSPPYG00000015691
Pongo pygmaeus
ENSPPYG00000015691
N
0.789
YTHDC2
Oryctolagus cuniculus
ENSOCUG00000012096
N
0.789
YTHDC2
Pan troglodytes
ENSPTRG00000017143
N
0.789
YTHDC2
Tupaia belangeri
ENSTBEG00000006872
N
0.789
YTHDC2
Sus scrofa
ENSSSCG00000014211
N
0.789
YTHDC2
Pteropus vampyrus
ENSPVAG00000012364
N
0.789
Ythdc2
Mus musculus
ENSMUSG00000034653
N
0.789
YTHDC2
Monodelphis domestica
ENSMODG00000015671
N
0.789
YTHDC2
Echinops telfairi
ENSETEG00000013681
N
0.789
YTHDC2
Equus caballus
ENSECAG00000020630
N
0.789
YTHDC2
Cavia porcellus
ENSCPOG00000000272
N
0.789
YTHDC2
Tarsius syrichta
ENSTSYG00000009634
N
0.789
YTHDC2
Homo sapiens
ENSG00000047188
N
0.789
YTHDC2
Macaca mulatta
ENSMMUG00000001376
N
0.789
YTHDC2
Macropus eugenii
ENSMEUG00000004414
N
0.789
YTHDC2
Gorilla gorilla
ENSGGOG00000014407
N
0.789
YTHDC2
Loxodonta africana
ENSLAFG00000003538
N
0.789
YTHDC2
Tursiops truncatus
ENSTTRG00000003116
N
0.778
YTHDC2
Vicugna pacos
ENSVPAG00000007516
N
0.778
YTHDC2
Ochotona princeps
ENSOPRG00000000462
N
0.778
YTHDC2
Myotis lucifugus
ENSMLUG00000006106
N
0.778
YTHDC2
Canis familiaris
ENSCAFG00000000224
N
0.778
YTHDC2
Sorex araneus
ENSSARG00000000924
N
0.778
YTHDC2
Anolis carolinensis
ENSACAG00000007754
N
0.767
ythdc2
Xenopus tropicalis
ENSXETG00000021517
N
0.733
YTHDC2
Procavia capensis
ENSPCAG00000007733
N
0.711
YTHDC2
Taeniopygia guttata
ENSTGUG00000003755
N
0.711