CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Procavia capensis
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSPCAG00000007733
T62111_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000007363
YTH
1317
1405
LVFSVQGSGHFQGFSRMCSEIGREKSQDWGSSGLGGVFKVEWIKESLPVQLAHHLFNPWNDNKKVQISRDGQELEPQVGEQLLKLWERL
Links
Other
YTH
family RBPs
Other
Procavia capensis
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
YTHDC2
Echinops telfairi
ENSETEG00000013681
N
0.911
YTHDC2
Equus caballus
ENSECAG00000020630
N
0.911
ENSPPYG00000015691
Pongo pygmaeus
ENSPPYG00000015691
N
0.911
YTHDC2
Callithrix jacchus
ENSCJAG00000016598
N
0.911
YTHDC2
Gorilla gorilla
ENSGGOG00000014407
N
0.911
YTHDC2
Loxodonta africana
ENSLAFG00000003538
N
0.911
YTHDC2
Ochotona princeps
ENSOPRG00000000462
N
0.911
YTHDC2
Oryctolagus cuniculus
ENSOCUG00000012096
N
0.911
Ythdc2
Mus musculus
ENSMUSG00000034653
N
0.911
YTHDC2
Macaca mulatta
ENSMMUG00000001376
N
0.911
YTHDC2
Bos taurus
ENSBTAG00000014099
N
0.911
YTHDC2
Cavia porcellus
ENSCPOG00000000272
N
0.911
YTHDC2
Tupaia belangeri
ENSTBEG00000006872
N
0.911
YTHDC2
Sus scrofa
ENSSSCG00000014211
N
0.911
YTHDC2
Tarsius syrichta
ENSTSYG00000009634
N
0.911
YTHDC2
Pteropus vampyrus
ENSPVAG00000012364
N
0.911
YTHDC2
Pan troglodytes
ENSPTRG00000017143
N
0.911
YTHDC2
Macropus eugenii
ENSMEUG00000004414
N
0.900
YTHDC2
Monodelphis domestica
ENSMODG00000015671
N
0.900
YTHDC2
Sorex araneus
ENSSARG00000000924
N
0.900
YTHDC2
Tursiops truncatus
ENSTTRG00000003116
N
0.900
YTHDC2
Homo sapiens
ENSG00000047188
N
0.900
YTHDC2
Canis familiaris
ENSCAFG00000000224
N
0.900
YTHDC2
Vicugna pacos
ENSVPAG00000007516
N
0.900
YTHDC2
Myotis lucifugus
ENSMLUG00000006106
N
0.889
YTHDC2
Anolis carolinensis
ENSACAG00000007754
N
0.878
ythdc2
Xenopus tropicalis
ENSXETG00000021517
N
0.844
YTHDC2
Taeniopygia guttata
ENSTGUG00000003755
N
0.811
ENSOANG00000005058
Ornithorhynchus anatinus
ENSOANG00000005058
N
0.811
YTHDC2
Gallus gallus
ENSGALG00000000189
N
0.789
YTHDC2
Otolemur garnettii
ENSOGAG00000001618
N
0.778
YTHDC2
Microcebus murinus
ENSMICG00000004030
N
0.778
YTHDC2
Dasypus novemcinctus
ENSDNOG00000012198
N
0.778
Ythdc2
Dipodomys ordii
ENSDORG00000007057
N
0.778
Ame_R012491
Ailuropoda melanoleuca
Ame_R012491
N
0.722
YTHDC2
Choloepus hoffmanni
ENSCHOG00000013323
N
0.711
GSC2
Danio rerio
ENSDARG00000076491
N
0.703
e_gw.87.3.1
Nematostella vectensis
e_gw.87.3.1
N
0.700