ythdc2 (Xenopus tropicalis)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSXETG00000021517 T62175_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000046513 YTH 1248 1337

Links

Other YTH family RBPs
Other Xenopus tropicalis RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YTHDC2 Anolis carolinensis ENSACAG00000007754 N 0.922
YTHDC2 Homo sapiens ENSG00000047188 N 0.900
Ythdc2 Mus musculus ENSMUSG00000034653 N 0.889
YTHDC2 Oryctolagus cuniculus ENSOCUG00000012096 N 0.889
YTHDC2 Echinops telfairi ENSETEG00000013681 N 0.889
YTHDC2 Monodelphis domestica ENSMODG00000015671 N 0.889
YTHDC2 Gorilla gorilla ENSGGOG00000014407 N 0.889
YTHDC2 Pteropus vampyrus ENSPVAG00000012364 N 0.889
YTHDC2 Macropus eugenii ENSMEUG00000004414 N 0.889
YTHDC2 Loxodonta africana ENSLAFG00000003538 N 0.889
YTHDC2 Equus caballus ENSECAG00000020630 N 0.889
YTHDC2 Sus scrofa ENSSSCG00000014211 N 0.889
YTHDC2 Bos taurus ENSBTAG00000014099 N 0.889
ENSPPYG00000015691 Pongo pygmaeus ENSPPYG00000015691 N 0.889
YTHDC2 Tarsius syrichta ENSTSYG00000009634 N 0.889
YTHDC2 Ochotona princeps ENSOPRG00000000462 N 0.889
YTHDC2 Pan troglodytes ENSPTRG00000017143 N 0.889
YTHDC2 Tupaia belangeri ENSTBEG00000006872 N 0.889
YTHDC2 Cavia porcellus ENSCPOG00000000272 N 0.889
YTHDC2 Callithrix jacchus ENSCJAG00000016598 N 0.889
YTHDC2 Macaca mulatta ENSMMUG00000001376 N 0.889
YTHDC2 Sorex araneus ENSSARG00000000924 N 0.878
YTHDC2 Tursiops truncatus ENSTTRG00000003116 N 0.878
YTHDC2 Canis familiaris ENSCAFG00000000224 N 0.878
YTHDC2 Vicugna pacos ENSVPAG00000007516 N 0.878
YTHDC2 Myotis lucifugus ENSMLUG00000006106 N 0.867
YTHDC2 Procavia capensis ENSPCAG00000007733 N 0.844
YTHDC2 Taeniopygia guttata ENSTGUG00000003755 N 0.833
YTHDC2 Gallus gallus ENSGALG00000000189 N 0.822
ENSOANG00000005058 Ornithorhynchus anatinus ENSOANG00000005058 N 0.811
YTHDC2 Microcebus murinus ENSMICG00000004030 N 0.756
Ythdc2 Dipodomys ordii ENSDORG00000007057 N 0.756
Ame_R012491 Ailuropoda melanoleuca Ame_R012491 N 0.744
YTHDC2 Dasypus novemcinctus ENSDNOG00000012198 N 0.744
YTHDC2 Otolemur garnettii ENSOGAG00000001618 N 0.744
ENSGACG00000018573 Gasterosteus aculeatus ENSGACG00000018573 N 0.733
YTHDC2 Choloepus hoffmanni ENSCHOG00000013323 N 0.733
YTHDC2 Oryzias latipes ENSORLG00000019098 N 0.722
YTHDC2 Takifugu rubripes ENSTRUG00000006717 N 0.722
e_gw.87.3.1 Nematostella vectensis e_gw.87.3.1 N 0.722
e_gw.410.37.1 Branchiostoma floridae e_gw.410.37.1 N 0.700
estExt_fgenesh2_pg.C_1230095 Branchiostoma floridae estExt_fgenesh2_pg.C_1230095 N 0.700