CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMMUG00000029888
(
Macaca mulatta
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSMMUG00000029888
T62071_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000034268
YTH
246
330
LLFSISGSGYFCGVAEMKCSVDSSTSAGVWSQDKWKGNFDIDDVPNNQLRHIRLENHDSKPVINHKTQEVPLEKEKQVLKIISYK
Links
Other
YTH
family RBPs
Other
Macaca mulatta
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000011226
Pongo pygmaeus
ENSPPYG00000011226
N
0.736
YTHDF1
Homo sapiens
ENSG00000149658
N
0.736
ENSACAG00000005560
Anolis carolinensis
ENSACAG00000005560
N
0.736
A6MKQ0_CALJA
Callithrix jacchus
ENSCJAG00000010056
N
0.736
YTHDF1
Gorilla gorilla
ENSGGOG00000008340
N
0.736
YTHDF1
Pan troglodytes
ENSPTRG00000013730
N
0.736
YTHDF1
Macaca mulatta
ENSMMUG00000009227
N
0.736
ENSMODG00000016842
Monodelphis domestica
ENSMODG00000016842
N
0.736
ENSOANG00000003723
Ornithorhynchus anatinus
ENSOANG00000003723
N
0.725
YTHDF1
Tursiops truncatus
ENSTTRG00000001804
N
0.725
YTHDF1
Erinaceus europaeus
ENSEEUG00000007461
N
0.725
LOC100060217
Equus caballus
ENSECAG00000019475
N
0.725
Ythdf1
Mus musculus
ENSMUSG00000038848
N
0.725
Q5ZME7_CHICK
Gallus gallus
ENSGALG00000005745
N
0.725
YTHDF1
Taeniopygia guttata
ENSTGUG00000007565
N
0.725
YTHDF1
Myotis lucifugus
ENSMLUG00000002241
N
0.725
YTHDF1
Loxodonta africana
ENSLAFG00000008884
N
0.725
ENSMGAG00000006139
Meleagris gallopavo
ENSMGAG00000006139
N
0.725
YTHDF1
Procavia capensis
ENSPCAG00000002452
N
0.725
YTHDF1
Canis familiaris
ENSCAFG00000012772
N
0.725
Ythdf1
Rattus norvegicus
ENSRNOG00000027015
N
0.725
YTHDF1
Pteropus vampyrus
ENSPVAG00000017568
N
0.725
YTHDF1
Cavia porcellus
ENSCPOG00000010202
N
0.714
Ythdf1
Dipodomys ordii
ENSDORG00000002879
N
0.714
AAH60445
Xenopus laevis
AAH60445
N
0.714
Ame_R014316
Ailuropoda melanoleuca
Ame_R014316
N
0.714
ythdf1
Xenopus tropicalis
ENSXETG00000027086
N
0.714
ENSMEUG00000011285
Macropus eugenii
ENSMEUG00000011285
N
0.703
YTHDF1
Ochotona princeps
ENSOPRG00000001758
N
0.703
YTHDF1
Otolemur garnettii
ENSOGAG00000000480
N
0.703
ENSMGAG00000011168
Meleagris gallopavo
ENSMGAG00000011168
N
0.703
ENSOANG00000005053
Ornithorhynchus anatinus
ENSOANG00000005053
N
0.703
ENSORLG00000014665
Oryzias latipes
ENSORLG00000014665
N
0.703
YTHDF1
Oryctolagus cuniculus
ENSOCUG00000012780
N
0.703
Q5ZLM1_CHICK
Gallus gallus
ENSGALG00000015505
N
0.703
ENSMODG00000008255
Monodelphis domestica
ENSMODG00000008255
N
0.703
AAH81017
Xenopus laevis
AAH81017
N
0.703
ythdf3
Xenopus tropicalis
ENSXETG00000021659
N
0.703
YTHDF3
Taeniopygia guttata
ENSTGUG00000011243
N
0.703
ENSACAG00000016837
Anolis carolinensis
ENSACAG00000016837
N
0.703
LOC776373
Gallus gallus
ENSGALG00000019473
N
0.703