MDP0000263392 (Malus x domestica)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		MDP0000263392 T00226_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000263392 CCCH ZF 31 56
MDP0000263392 KH 102 164
MDP0000263392 CCCH ZF 194 219

Links

Other CCCH ZF,KH family RBPs
Other Malus x domestica RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
18449_YNL110C Saccharomyces mikatae 18449_YNL110C N 0.000
18916_YNL110C Saccharomyces paradoxus 18916_YNL110C N 0.000
A7TR62_VANPO Vanderwaltozyma polyspora A7TR62_VANPO N 0.000
AFL224W Ashbya gossypii AFL224W N 0.000
CAGL0L03806g Candida glabrata CAGL0L03806g N 0.000
KLLA0F23650g Kluyveromyces lactis KLLA0F23650g N 0.000
KLTH0D09262g Kluyveromyces thermotolerans KLTH0D09262g N 0.000
Kwal_8458 Kluyveromyces waltii Kwal_8458 N 0.000
SAKL0E10604g Lachancea kluyveri SAKL0E10604g N 0.000
Skud_Contig1428.4 Saccharomyces kudriavzevii Skud_Contig1428.4 N 0.000
NOP15 Saccharomyces cerevisiae YNL110C N 0.000
ZYRO0B09790g Zygosaccharomyces rouxii ZYRO0B09790g N 0.000