MDP0000263392 (Malus x domestica)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		MDP0000263392 T00226_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000263392 CCCH ZF 31 56
MDP0000263392 KH 102 164
MDP0000263392 CCCH ZF 194 219

Links

Other CCCH ZF,KH family RBPs
Other Malus x domestica RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9GYL2_POPTR Populus trichocarpa POPTR_0003s21780 N 0.843
LOC_Os02g10080 Oryza sativa LOC_Os02g10080 N 0.835
B9GLM3_POPTR Populus trichocarpa POPTR_0001s05070 N 0.826
LOC_Os04g57010 Oryza sativa LOC_Os04g57010 N 0.810
Cucsa.242740 Cucumis sativus Cucsa.242740 N 0.809
Cucsa.263980 Cucumis sativus Cucsa.263980 N 0.800
PDK_20s1321721g007 Phoenix dactylifera PDK_20s1321721g007 N 0.800
GRMZM2G151689 Zea mays GRMZM2G151689 N 0.793
GRMZM2G110402 Zea mays GRMZM2G110402 N 0.791
Sb10g024330 Sorghum bicolor Sb10g024330 N 0.791
Cucsa.142970 Cucumis sativus Cucsa.142970 N 0.774
GRMZM2G071034 Zea mays GRMZM2G071034 N 0.765
GRMZM2G124476 Zea mays GRMZM2G124476 N 0.741
GSVIVG00025360001 Vitis vinifera GSVIVG00025360001 N 0.733
GSVIVG00033508001 Vitis vinifera GSVIVG00033508001 N 0.724
GSVIVG00001369001 Vitis vinifera GSVIVG00001369001 N 0.716