U2AF1L4 (Loxodonta africana)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSLAFG00000012923 T00535_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000010805 CCCH ZF 13 39
ENSLAFP00000010805 RRM 82 141
ENSLAFP00000010805 CCCH ZF 149 175
ENSLAFP00000024653 CCCH ZF 13 39
ENSLAFP00000024653 RRM 82 141
ENSLAFP00000024653 CCCH ZF 149 175

Links

Other CCCH ZF,RRM family RBPs
Other Loxodonta africana RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
0300010273 Ostreococcus tauri 0300010273 I 0.000
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.000
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.000
CMA121C Cyanidioschyzon merolae CMA121C N 0.000
EDI_287240 Entamoeba dispar EDI_287240 N 0.000
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.000
EHI_008770 Entamoeba histolytica EHI_008770 N 0.000
EIN_295900 Entamoeba invadens EIN_295900 N 0.000
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.000
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.000
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.000
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.000
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.000
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.000
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.000
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.000
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.000
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.000
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.000
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.000
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.000
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.000
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.000
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
gw1.4.464.1 Volvox carteri gw1.4.464.1 N 0.000
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.000
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000