CMA121C (Cyanidioschyzon merolae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CMA121C T01782_0.6 Cyanidioschyzon merolae Genome Project (2008-Jan-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CMA121C CCCH ZF 240 266
CMA121C CCCH ZF 278 304

Links

Other CCCH ZF family RBPs
Other Cyanidioschyzon merolae RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
0300010273 Ostreococcus tauri 0300010273 I 0.796
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.796
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.778
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.778
estExt_fgeneshDP_kg.C_230001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_230001 I 0.759
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.759
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.759
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.759
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.741
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.741
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.722
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.722
PTTG_07763 Puccinia triticina PTTG_07763 N 0.722
gw1.14.301.1 Coccomyxa C 169 gw1.14.301.1 N 0.722
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.722
EIN_295900 Entamoeba invadens EIN_295900 N 0.722
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.722
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.704
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.704
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.704
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.704
PITG_03115 Phytophthora infestans PITG_03115 N 0.704
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.704
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.704
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.704
EHI_008770 Entamoeba histolytica EHI_008770 N 0.704
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.704
EDI_287240 Entamoeba dispar EDI_287240 N 0.704
fgenesh1_pg.C_scaffold_4000193 Sporobolomyces roseus fgenesh1_pg.C_scaffold_4000193 N 0.704
s_442346 Phytophthora sojae s_442346 N 0.704
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.704
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.704
fgenesh1_pg.scaffold_257000036 Physcomitrella patens fgenesh1_pg.scaffold_257000036 N 0.704