XM_001380899.1 (Monodelphis domestica)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSMODG00000017202 T00562_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000021460 CCCH ZF 172 198
ENSMODP00000021460 RRM 245 303
ENSMODP00000021460 CCCH ZF 312 337
ENSMODP00000037913 CCCH ZF 159 185
ENSMODP00000037913 RRM 232 290
ENSMODP00000037913 CCCH ZF 299 324
ENSMODP00000037914 CCCH ZF 164 190
ENSMODP00000037914 RRM 237 295
ENSMODP00000037914 CCCH ZF 304 329

Links

Other CCCH ZF,RRM family RBPs
Other Monodelphis domestica RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018576 Ailuropoda melanoleuca Ame_R018576 N 0.911
ENSACAG00000017034 Anolis carolinensis ENSACAG00000017034 N 0.920
ENSBTAG00000020419 Bos taurus ENSBTAG00000020419 N 0.911
XM_548872.2 Canis familiaris ENSCAFG00000012201 N 0.902
XM_542254.2 Canis familiaris ENSCAFG00000025134 N 0.718
ENSCJAG00000020956 Callithrix jacchus ENSCJAG00000020956 N 0.911
ENSCPOG00000004227 Cavia porcellus ENSCPOG00000004227 N 0.911
zrsr2 Danio rerio ENSDARG00000058448 N 0.804
Zrsr1 Dipodomys ordii ENSDORG00000001238 N 0.812
LOC100056195 Equus caballus ENSECAG00000006454 N 0.902
ENSEEUG00000002115 Erinaceus europaeus ENSEEUG00000002115 N 0.911
ENSETEG00000005141 Echinops telfairi ENSETEG00000005141 N 0.812
ZRSR2 Homo sapiens ENSG00000169249 N 0.920
ZRSR1 Homo sapiens ENSG00000212643 N 0.920
ZRSR2 Gasterosteus aculeatus ENSGACG00000015069 N 0.777
ZRSR2 Gallus gallus ENSGALG00000016552 N 0.884
ENSGGOG00000011962 Gorilla gorilla ENSGGOG00000011962 N 0.920
ENSLAFG00000009326 Loxodonta africana ENSLAFG00000009326 N 0.875
ENSLAFG00000018654 Loxodonta africana ENSLAFG00000018654 N 0.866
ENSMGAG00000014689 Meleagris gallopavo ENSMGAG00000014689 N 0.884
ENSMICG00000003211 Microcebus murinus ENSMICG00000003211 N 0.911
ENSMLUG00000009780 Myotis lucifugus ENSMLUG00000009780 N 0.920
ZRSR2 Macaca mulatta ENSMMUG00000014054 N 0.920
Zrsr2 Mus musculus ENSMUSG00000031370 N 0.884
Zrsr1 Mus musculus ENSMUSG00000044068 N 0.857
ENSOANG00000002571 Ornithorhynchus anatinus ENSOANG00000002571 N 0.973
ENSOCUG00000004295 Oryctolagus cuniculus ENSOCUG00000004295 N 0.893
ENSPPYG00000020150 Pongo pygmaeus ENSPPYG00000020150 N 0.920
ZRSR1 Pan troglodytes ENSPTRG00000017138 N 0.920
ZRSR2 Pan troglodytes ENSPTRG00000021693 N 0.920
ENSPVAG00000010216 Pteropus vampyrus ENSPVAG00000010216 N 0.902
Zrsr1 Rattus norvegicus ENSRNOG00000009639 N 0.857
Zrsr2 Rattus norvegicus ENSRNOG00000033176 N 0.884
ENSTBEG00000008533 Tupaia belangeri ENSTBEG00000008533 N 0.857
ZRSR2 Taeniopygia guttata ENSTGUG00000007964 N 0.893
ZRSR2 Tetraodon nigroviridis ENSTNIG00000009495 N 0.804
Q9W6Q9_FUGRU Takifugu rubripes ENSTRUG00000017089 N 0.804
ENSTSYG00000005278 Tarsius syrichta ENSTSYG00000005278 N 0.911
ENSVPAG00000007641 Vicugna pacos ENSVPAG00000007641 N 0.920