CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOANG00000002571
(
Ornithorhynchus anatinus
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ENSOANG00000002571
T00573_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000004075
CCCH ZF
168
194
KDRANCPFYIKTGSCRFGDRCSRKHNY
ENSOANP00000004075
RRM
241
299
YEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYAGRQLQ
ENSOANP00000004075
CCCH ZF
308
333
WKMAICGLFERQKCPRGKHCNFLHVF
ENSOANP00000004076
CCCH ZF
155
181
KDRANCPFYIKTGSCRFGDRCSRKHNY
ENSOANP00000004076
RRM
228
286
YEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYAGRQLQ
ENSOANP00000004076
CCCH ZF
295
320
WKMAICGLFERQKCPRGKHCNFLHVF
ENSOANP00000026473
CCCH ZF
151
177
KDRANCPFYIKTGSCRFGDRCSRKHNY
ENSOANP00000026473
RRM
224
282
YEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYAGRQLQ
ENSOANP00000026473
CCCH ZF
291
316
WKMAICGLFERQKCPRGKHCNFLHVF
Links
Other
CCCH ZF,RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_001380899.1
Monodelphis domestica
ENSMODG00000017202
N
0.973
ENSACAG00000017034
Anolis carolinensis
ENSACAG00000017034
N
0.946
ZRSR1
Homo sapiens
ENSG00000212643
N
0.929
ZRSR2
Homo sapiens
ENSG00000169249
N
0.929
ENSVPAG00000007641
Vicugna pacos
ENSVPAG00000007641
N
0.929
ENSTSYG00000005278
Tarsius syrichta
ENSTSYG00000005278
N
0.929
ENSGGOG00000011962
Gorilla gorilla
ENSGGOG00000011962
N
0.929
ZRSR1
Pan troglodytes
ENSPTRG00000017138
N
0.929
ZRSR2
Macaca mulatta
ENSMMUG00000014054
N
0.929
ZRSR2
Pan troglodytes
ENSPTRG00000021693
N
0.929
ENSPPYG00000020150
Pongo pygmaeus
ENSPPYG00000020150
N
0.929
ENSMLUG00000009780
Myotis lucifugus
ENSMLUG00000009780
N
0.929
ENSCPOG00000004227
Cavia porcellus
ENSCPOG00000004227
N
0.920
LOC100056195
Equus caballus
ENSECAG00000006454
N
0.920
ENSEEUG00000002115
Erinaceus europaeus
ENSEEUG00000002115
N
0.920
ENSMICG00000003211
Microcebus murinus
ENSMICG00000003211
N
0.920
ENSCJAG00000020956
Callithrix jacchus
ENSCJAG00000020956
N
0.920
Ame_R018576
Ailuropoda melanoleuca
Ame_R018576
N
0.920
ENSBTAG00000020419
Bos taurus
ENSBTAG00000020419
N
0.920
XM_548872.2
Canis familiaris
ENSCAFG00000012201
N
0.911
ENSPVAG00000010216
Pteropus vampyrus
ENSPVAG00000010216
N
0.911
ENSOCUG00000004295
Oryctolagus cuniculus
ENSOCUG00000004295
N
0.911
ZRSR2
Taeniopygia guttata
ENSTGUG00000007964
N
0.902
ENSMGAG00000014689
Meleagris gallopavo
ENSMGAG00000014689
N
0.893
Zrsr2
Mus musculus
ENSMUSG00000031370
N
0.893
Zrsr2
Rattus norvegicus
ENSRNOG00000033176
N
0.893
ZRSR2
Gallus gallus
ENSGALG00000016552
N
0.893
ENSLAFG00000009326
Loxodonta africana
ENSLAFG00000009326
N
0.884
ENSLAFG00000018654
Loxodonta africana
ENSLAFG00000018654
N
0.875
Zrsr1
Rattus norvegicus
ENSRNOG00000009639
N
0.866
Zrsr1
Mus musculus
ENSMUSG00000044068
N
0.866
ENSTBEG00000008533
Tupaia belangeri
ENSTBEG00000008533
N
0.866
Zrsr1
Dipodomys ordii
ENSDORG00000001238
N
0.830
ENSETEG00000005141
Echinops telfairi
ENSETEG00000005141
N
0.821
ZRSR2
Tetraodon nigroviridis
ENSTNIG00000009495
N
0.812
zrsr2
Danio rerio
ENSDARG00000058448
N
0.812
Q9W6Q9_FUGRU
Takifugu rubripes
ENSTRUG00000017089
N
0.812
ZRSR2
Gasterosteus aculeatus
ENSGACG00000015069
N
0.786
XM_542254.2
Canis familiaris
ENSCAFG00000025134
N
0.726
ZRSR2
Oryzias latipes
ENSORLG00000003476
N
0.705