CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL012456
(
Aedes aegypti
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
AAEL012456
T01850_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL012456-PA
CCCH ZF
77
99
CTKYDETTGICPDGDDCPFLHRT
AAEL012456-PA
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Aedes aegypti
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
188708
Helobdella robusta
188708
N
0.740
AAH46725
Xenopus laevis
AAH46725
N
0.880
AGAP000684
Anopheles gambiae
AGAP000684
N
0.961
Ame_R007986
Ailuropoda melanoleuca
Ame_R007986
N
0.800
UNK
Anolis carolinensis
ENSACAG00000007303
N
0.860
UNKL
Bos taurus
ENSBTAG00000014126
N
0.712
A1A4K6_BOVIN
Bos taurus
ENSBTAG00000016287
N
0.820
UNK_CANFA
Canis familiaris
ENSCAFG00000004925
N
0.820
UNKL
Callithrix jacchus
ENSCJAG00000013151
N
0.750
LOC100390502
Callithrix jacchus
ENSCJAG00000014056
N
0.820
UNKL
Cavia porcellus
ENSCPOG00000011846
N
0.784
UNK
Cavia porcellus
ENSCPOG00000012679
N
0.820
unk
Danio rerio
ENSDARG00000000935
N
0.780
UNKL
Danio rerio
ENSDARG00000037838
N
0.863
Unk
Dipodomys ordii
ENSDORG00000008133
N
0.820
LOC100067623
Equus caballus
ENSECAG00000010641
N
0.750
UNK
Equus caballus
ENSECAG00000024672
N
0.820
UNK
Felis catus
ENSFCAG00000005757
N
0.824
UNKL
Homo sapiens
ENSG00000059145
N
0.750
UNK
Homo sapiens
ENSG00000132478
N
0.820
UNK
Gasterosteus aculeatus
ENSGACG00000005102
N
0.808
UNK
Gallus gallus
ENSGALG00000002278
N
0.860
UNKL
Gallus gallus
ENSGALG00000006450
N
0.843
UNK
Gorilla gorilla
ENSGGOG00000009203
N
0.820
UNKL
Gorilla gorilla
ENSGGOG00000014915
N
0.750
UNKL
Loxodonta africana
ENSLAFG00000018262
N
0.784
UNK
Loxodonta africana
ENSLAFG00000022662
N
0.820
UNK
Macropus eugenii
ENSMEUG00000004094
N
0.840
UNK
Meleagris gallopavo
ENSMGAG00000004713
N
0.860
UNKL
Meleagris gallopavo
ENSMGAG00000006920
N
0.843
UNK
Myotis lucifugus
ENSMLUG00000015453
N
0.840
UNK
Macaca mulatta
ENSMMUG00000013646
N
0.820
UNK
Monodelphis domestica
ENSMODG00000007684
N
0.840
UNKL
Monodelphis domestica
ENSMODG00000016188
N
0.843
Unkl
Mus musculus
ENSMUSG00000015127
N
0.780
Unk
Mus musculus
ENSMUSG00000020770
N
0.820
UNK
Oryctolagus cuniculus
ENSOCUG00000014994
N
0.820
UNK
Ochotona princeps
ENSOPRG00000012784
N
0.740
UNKL
Oryzias latipes
ENSORLG00000005070
N
0.863
UNK
Procavia capensis
ENSPCAG00000004504
N
0.840
ENSPPYG00000006950
Pongo pygmaeus
ENSPPYG00000006950
N
0.731
ENSPPYG00000008637
Pongo pygmaeus
ENSPPYG00000008637
N
0.820
UNK
Pan troglodytes
ENSPTRG00000009656
N
0.820
UNK
Pteropus vampyrus
ENSPVAG00000008460
N
0.820
D4A564_RAT
Rattus norvegicus
ENSRNOG00000006600
N
0.800
RGD1565247
Rattus norvegicus
ENSRNOG00000017598
N
0.765
UNK
Sus scrofa
ENSSSCG00000017201
N
0.820
UNK
Spermophilus tridecemlineatus
ENSSTOG00000013344
N
0.820
UNK
Taeniopygia guttata
ENSTGUG00000008279
N
0.860
UNKL
Tetraodon nigroviridis
ENSTNIG00000018588
N
0.824
UNK
Takifugu rubripes
ENSTRUG00000007192
N
0.820
UNKL
Takifugu rubripes
ENSTRUG00000012086
N
0.824
UNK
Tursiops truncatus
ENSTTRG00000015890
N
0.800
unk
Xenopus tropicalis
ENSXETG00000012578
N
0.860
estExt_Genewise1.C_sca_750115
Lottia gigantea
estExt_Genewise1.C_sca_750115
N
0.840
e_gw.394.2.1
Branchiostoma floridae
e_gw.394.2.1
N
0.780
ISCW001613
Ixodes scapularis
ISCW001613
N
0.700
PHUM219250
Pediculus humanus
PHUM219250
N
0.820
SNAPOd2T00019464001
Oikopleura dioica
SNAPOd2T00019464001
N
0.780