UNKL (Oryzias latipes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSORLG00000005070 T03128_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006390 CCCH ZF 76 99
ENSORLP00000006390 CCCH ZF 282 308
ENSORLP00000006392 CCCH ZF 70 93
ENSORLP00000006392 CCCH ZF 276 302

Links

Other CCCH ZF family RBPs
Other Oryzias latipes RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
188708 Helobdella robusta 188708 N 0.784
AAEL012456 Aedes aegypti AAEL012456 N 0.863
AAH46725 Xenopus laevis AAH46725 N 0.882
AGAP000684 Anopheles gambiae AGAP000684 N 0.863
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.804
UNK Anolis carolinensis ENSACAG00000007303 N 0.863
UNKL Bos taurus ENSBTAG00000014126 N 0.846
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.824
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.824
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.865
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.824
UNKL Cavia porcellus ENSCPOG00000011846 N 0.922
UNK Cavia porcellus ENSCPOG00000012679 N 0.824
unk Danio rerio ENSDARG00000000935 N 0.765
UNKL Danio rerio ENSDARG00000037838 N 1.000
Unk Dipodomys ordii ENSDORG00000008133 N 0.824
LOC100067623 Equus caballus ENSECAG00000010641 N 0.885
UNK Equus caballus ENSECAG00000024672 N 0.824
UNK Felis catus ENSFCAG00000005757 N 0.863
UNKL Homo sapiens ENSG00000059145 N 0.885
UNK Homo sapiens ENSG00000132478 N 0.824
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.846
UNK Gallus gallus ENSGALG00000002278 N 0.863
UNKL Gallus gallus ENSGALG00000006450 N 0.980
UNK Gorilla gorilla ENSGGOG00000009203 N 0.824
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.885
UNKL Loxodonta africana ENSLAFG00000018262 N 0.922
UNK Loxodonta africana ENSLAFG00000022662 N 0.824
UNK Macropus eugenii ENSMEUG00000004094 N 0.843
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.863
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.980
UNK Myotis lucifugus ENSMLUG00000015453 N 0.824
UNK Macaca mulatta ENSMMUG00000013646 N 0.824
UNK Monodelphis domestica ENSMODG00000007684 N 0.843
UNKL Monodelphis domestica ENSMODG00000016188 N 0.980
Unkl Mus musculus ENSMUSG00000015127 N 0.882
Unk Mus musculus ENSMUSG00000020770 N 0.804
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.824
UNK Ochotona princeps ENSOPRG00000012784 N 0.745
UNK Procavia capensis ENSPCAG00000004504 N 0.824
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.865
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.824
UNK Pan troglodytes ENSPTRG00000009656 N 0.824
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.824
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.804
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.902
UNK Sus scrofa ENSSSCG00000017201 N 0.824
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.824
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.863
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.922
UNK Takifugu rubripes ENSTRUG00000007192 N 0.824
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.941
UNK Tursiops truncatus ENSTTRG00000015890 N 0.804
unk Xenopus tropicalis ENSXETG00000012578 N 0.863
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.902
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.843
ISCW001613 Ixodes scapularis ISCW001613 N 0.706
PHUM219250 Pediculus humanus PHUM219250 N 0.784
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.843