MBNL2 (Vicugna pacos)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSVPAG00000010696 T03623_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.882
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.882
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000009958 CCCH ZF 16 40
ENSVPAP00000009958 CCCH ZF 57 72
ENSVPAP00000009958 CCCH ZF 177 203
ENSVPAP00000009958 CCCH ZF 215 237

Links

Other CCCH ZF family RBPs
Other Vicugna pacos RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R004201 Ailuropoda melanoleuca Ame_R004201 N 0.000
A5PJM0_BOVIN Bos taurus ENSBTAG00000004564 N 0.000
MBNL2 Canis familiaris ENSCAFG00000005523 I 1.000
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.891
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.859
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.000
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.000
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.000
MBNL1 Echinops telfairi ENSETEG00000016568 N 0.000
MBNL1 Felis catus ENSFCAG00000002293 N 0.000
MBNL2 Felis catus ENSFCAG00000005148 N 0.000
MBNL3 Homo sapiens ENSG00000076770 I 0.870
MBNL1 Homo sapiens ENSG00000152601 D 0.891
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.891
MBNL1 Meleagris gallopavo ENSMGAG00000010862 N 0.000
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.870
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.000
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.891
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.891
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 1.000
MBNL1 Otolemur garnettii ENSOGAG00000009336 N 0.000
MBNL2 Otolemur garnettii ENSOGAG00000017001 N 0.000
MBNL1 Procavia capensis ENSPCAG00000002143 N 0.000
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.000
Q8CIQ0_RAT Rattus norvegicus ENSRNOG00000014076 N 0.000
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.000
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.000
MBNL1 Tetraodon nigroviridis ENSTNIG00000007695 N 0.000
MBNL3 Tarsius syrichta ENSTSYG00000014189 N 0.000
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.891