CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL3
(
Procavia capensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSPCAG00000014188
T03183_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000013242
CCCH ZF
1
14
GRCTRENCKYLHPP
ENSPCAP00000013242
CCCH ZF
114
140
DKLEVCREFQRGNCTRGENDCRYAHPT
ENSPCAP00000013242
CCCH ZF
151
174
TVRICMDYIKGRCTREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Procavia capensis
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MBNL3
Tupaia belangeri
ENSTBEG00000008063
N
0.954
MBNL3
Sus scrofa
ENSSSCG00000012676
N
0.954
MBNL3
Macaca mulatta
ENSMMUG00000003071
I
0.940
MBNL3
Homo sapiens
ENSG00000076770
I
0.940
LOC100397507
Callithrix jacchus
ENSCJAG00000004080
I
0.940
MBNL3
Cavia porcellus
ENSCPOG00000008092
N
0.938
MBNL3
Ornithorhynchus anatinus
ENSOANG00000011697
I
0.938
MBNL3
Monodelphis domestica
ENSMODG00000015304
I
0.924
MBNL1
Tetraodon nigroviridis
ENSTNIG00000007695
N
0.879
MBNL2
Felis catus
ENSFCAG00000005148
N
0.862
MBNL1
Sus scrofa
ENSSSCG00000011720
N
0.862
Q8CIQ0_RAT
Rattus norvegicus
ENSRNOG00000014076
N
0.862
MBNL1
Procavia capensis
ENSPCAG00000002143
N
0.862
MBNL1
Meleagris gallopavo
ENSMGAG00000010862
N
0.862
MBNL1
Felis catus
ENSFCAG00000002293
N
0.862
Ame_R004201
Ailuropoda melanoleuca
Ame_R004201
N
0.862
A5PJM0_BOVIN
Bos taurus
ENSBTAG00000004564
N
0.862
MBNL3
Tarsius syrichta
ENSTSYG00000014189
N
0.851
MBNL1
Gorilla gorilla
ENSGGOG00000009430
I
0.848
MBNL1
Homo sapiens
ENSG00000152601
D
0.848
mbnl3
Xenopus tropicalis
ENSXETG00000005409
I
0.847
MBNL2
Oryctolagus cuniculus
ENSOCUG00000000220
I
0.836
MBNL2
Canis familiaris
ENSCAFG00000005523
I
0.836
LOC100392264
Callithrix jacchus
ENSCJAG00000001054
I
0.836
XR_020327.1
Pan troglodytes
ENSPTRG00000022280
N
0.724
MBNL3
Echinops telfairi
ENSETEG00000015907
N
0.724