AAH46725 (Xenopus laevis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AAH46725 T06692_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAH46725 CCCH ZF 98 120
AAH46725 CCCH ZF 302 328

Links

Other CCCH ZF family RBPs
Other Xenopus laevis RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
188708 Helobdella robusta 188708 N 0.740
AAEL012456 Aedes aegypti AAEL012456 N 0.880
AGAP000684 Anopheles gambiae AGAP000684 N 0.843
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.920
UNK Anolis carolinensis ENSACAG00000007303 N 0.980
UNKL Bos taurus ENSBTAG00000014126 N 0.788
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.940
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.940
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.788
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.940
UNKL Cavia porcellus ENSCPOG00000011846 N 0.843
UNK Cavia porcellus ENSCPOG00000012679 N 0.940
unk Danio rerio ENSDARG00000000935 N 0.860
UNKL Danio rerio ENSDARG00000037838 N 0.882
Unk Dipodomys ordii ENSDORG00000008133 N 0.940
LOC100067623 Equus caballus ENSECAG00000010641 N 0.808
UNK Equus caballus ENSECAG00000024672 N 0.940
UNK Felis catus ENSFCAG00000005757 N 0.941
UNKL Homo sapiens ENSG00000059145 N 0.808
UNK Homo sapiens ENSG00000132478 N 0.940
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.904
UNK Gallus gallus ENSGALG00000002278 N 0.980
UNKL Gallus gallus ENSGALG00000006450 N 0.863
UNK Gorilla gorilla ENSGGOG00000009203 N 0.940
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.808
UNKL Loxodonta africana ENSLAFG00000018262 N 0.843
UNK Loxodonta africana ENSLAFG00000022662 N 0.940
UNK Macropus eugenii ENSMEUG00000004094 N 0.960
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.980
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.863
UNK Myotis lucifugus ENSMLUG00000015453 N 0.920
UNK Macaca mulatta ENSMMUG00000013646 N 0.940
UNK Monodelphis domestica ENSMODG00000007684 N 0.960
UNKL Monodelphis domestica ENSMODG00000016188 N 0.902
Unkl Mus musculus ENSMUSG00000015127 N 0.840
Unk Mus musculus ENSMUSG00000020770 N 0.900
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.940
UNK Ochotona princeps ENSOPRG00000012784 N 0.860
UNKL Oryzias latipes ENSORLG00000005070 N 0.882
UNK Procavia capensis ENSPCAG00000004504 N 0.920
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.788
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.940
UNK Pan troglodytes ENSPTRG00000009656 N 0.940
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.940
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.920
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.824
UNK Sus scrofa ENSSSCG00000017201 N 0.940
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.940
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.980
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.824
UNK Takifugu rubripes ENSTRUG00000007192 N 0.920
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.843
UNK Tursiops truncatus ENSTTRG00000015890 N 0.920
unk Xenopus tropicalis ENSXETG00000012578 N 0.980
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.880
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.800
ISCW001613 Ixodes scapularis ISCW001613 N 0.700
PHUM219250 Pediculus humanus PHUM219250 N 0.800
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.820