PTRG_03169 (Pyrenophora tritici repentis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PTRG_03169 T08284_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_03169 CCHC ZF 614 628

Links

Other CCHC ZF family RBPs
Other Pyrenophora tritici repentis RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29005.m000257 Ricinus communis 29005.m000257 N 0.000
AT1G66260 Arabidopsis thaliana AT1G66260-TAIR-G N 0.000
ALY4 Arabidopsis thaliana AT5G37720-TAIR-G N 0.000
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.000
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.000
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.000
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.000
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.000
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.000
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.000
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.000
XM_002870512.1 Arabidopsis lyrata fgenesh2_kg.7__3183__AT5G37720.2 N 0.000
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.000
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.000
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.000
MDP0000202749 Malus x domestica MDP0000202749 N 0.000
MDP0000275263 Malus x domestica MDP0000275263 N 0.000
MDP0000299639 Malus x domestica MDP0000299639 N 0.000
Medtr3g087640 Medicago truncatula Medtr3g087640 N 0.000
Medtr3g087650 Medicago truncatula Medtr3g087650 N 0.000
mgf000319m Mimulus guttatus mgf000319m N 0.000
PK16300.1 Cannabis sativa PK16300.1 N 0.000
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.000
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.000
ppa009623m Prunus persica ppa009623m N 0.000