ALY4 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G37720-TAIR-G T32830_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G37720.1-P RRM 95 164
AT5G37720.2-P RRM 95 164

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002870512.1 Arabidopsis lyrata fgenesh2_kg.7__3183__AT5G37720.2 N 1.000
XM_002888447.1 Arabidopsis lyrata fgenesh2_kg.2__861__AT1G66260.1 N 0.829
MDP0000202749 Malus x domestica MDP0000202749 N 0.814
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.814
MDP0000275263 Malus x domestica MDP0000275263 N 0.814
ppa009623m Prunus persica ppa009623m N 0.814
AT1G66260 Arabidopsis thaliana AT1G66260-TAIR-G N 0.814
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.814
MDP0000299639 Malus x domestica MDP0000299639 N 0.814
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.814
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.814
PK16300.1 Cannabis sativa PK16300.1 N 0.800
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.800
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.800
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.800
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.800
Medtr3g087650 Medicago truncatula Medtr3g087650 N 0.786
Medtr3g087640 Medicago truncatula Medtr3g087640 N 0.786
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.786
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.771
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.771
B9H3A7_POPTR Populus trichocarpa POPTR_0004s08540 N 0.771
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.757
mgf000319m Mimulus guttatus mgf000319m N 0.757
29005.m000257 Ricinus communis 29005.m000257 N 0.743