ZCCHC13 (Sus scrofa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSSSCG00000012417 T10482_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000013212 CCHC ZF 4 21
ENSSSCP00000013212 CCHC ZF 46 62
ENSSSCP00000013212 CCHC ZF 66 83
ENSSSCP00000013212 CCHC ZF 90 107
ENSSSCP00000013212 CCHC ZF 111 128
ENSSSCP00000013212 CCHC ZF 129 146
ENSSSCP00000013212 CCHC ZF 150 167

Links

Other CCHC ZF family RBPs
Other Sus scrofa RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA81168 Xenopus laevis AAA81168 N 0.832
AAI69746 Xenopus laevis AAI69746 N 0.840
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.856
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.000
CAA69031 Xenopus laevis CAA69031 N 0.840
CNBP Anolis carolinensis ENSACAG00000013192 N 0.840
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.856
CNBP Canis familiaris ENSCAFG00000004320 N 0.856
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.728
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.848
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.832
CNBP Cavia porcellus ENSCPOG00000012816 N 0.856
zff9 Danio rerio ENSDARG00000045776 N 0.000
cnbp Danio rerio ENSDARG00000070922 N 0.000
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.856
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.000
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.000
LOC100050146 Equus caballus ENSECAG00000009512 N 0.856
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.000
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.856
CNBP Felis catus ENSFCAG00000008665 N 0.856
CNBP Homo sapiens ENSG00000169714 N 0.856
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.848
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.848
CNBP Loxodonta africana ENSLAFG00000002502 N 0.856
CNBP Macropus eugenii ENSMEUG00000011699 N 0.856
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.856
CNBP Macaca mulatta ENSMMUG00000011585 N 0.856
CNBP Monodelphis domestica ENSMODG00000008362 N 0.856
Cnbp Mus musculus ENSMUSG00000030057 N 0.856
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.792
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.856
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.857
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.848
CNBP Ochotona princeps ENSOPRG00000005487 N 0.856
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.000
CNBP Procavia capensis ENSPCAG00000011572 N 0.856
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.856
CNBP Pan troglodytes ENSPTRG00000015369 N 0.856
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.816
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.848
CNBP Sorex araneus ENSSARG00000011874 N 0.856
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.856
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.848
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.000
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.848
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.856
CNBP Vicugna pacos ENSVPAG00000007138 N 0.848
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.848