ZCCHC13 (Cavia porcellus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSCPOG00000004667 T10061_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000004203 CCHC ZF 4 21
ENSCPOP00000004203 CCHC ZF 45 61
ENSCPOP00000004203 CCHC ZF 64 81
ENSCPOP00000004203 CCHC ZF 88 105
ENSCPOP00000004203 CCHC ZF 109 126
ENSCPOP00000004203 CCHC ZF 127 144
ENSCPOP00000004203 CCHC ZF 148 165

Links

Other CCHC ZF family RBPs
Other Cavia porcellus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.832
CNBP Pan troglodytes ENSPTRG00000015369 N 0.776
CNBP Sorex araneus ENSSARG00000011874 N 0.776
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.776
CNBP Cavia porcellus ENSCPOG00000012816 N 0.776
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.776
CNBP Ochotona princeps ENSOPRG00000005487 N 0.776
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.776
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.776
CNBP Canis familiaris ENSCAFG00000004320 N 0.776
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.776
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.776
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.776
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.776
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.776
CNBP Procavia capensis ENSPCAG00000011572 N 0.776
CNBP Homo sapiens ENSG00000169714 N 0.776
CNBP Loxodonta africana ENSLAFG00000002502 N 0.776
CNBP Felis catus ENSFCAG00000008665 N 0.776
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.776
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.776
LOC100050146 Equus caballus ENSECAG00000009512 N 0.776
CNBP Macropus eugenii ENSMEUG00000011699 N 0.776
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.776
Cnbp Mus musculus ENSMUSG00000030057 N 0.776
CNBP Macaca mulatta ENSMMUG00000011585 N 0.776
CNBP Monodelphis domestica ENSMODG00000008362 N 0.776
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.776
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.770
CNBP Anolis carolinensis ENSACAG00000013192 N 0.768
AAI69746 Xenopus laevis AAI69746 N 0.768
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.768
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.768
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.768
CNBP Vicugna pacos ENSVPAG00000007138 N 0.768
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.768
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.768
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.760
CAA69031 Xenopus laevis CAA69031 N 0.760
AAA81168 Xenopus laevis AAA81168 N 0.760
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.736