CNBP (Cavia porcellus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSCPOG00000012816 T10065_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011536 CCHC ZF 4 21
ENSCPOP00000011536 CCHC ZF 52 68
ENSCPOP00000011536 CCHC ZF 72 89
ENSCPOP00000011536 CCHC ZF 96 113
ENSCPOP00000011536 CCHC ZF 117 134
ENSCPOP00000011536 CCHC ZF 135 152
ENSCPOP00000011536 CCHC ZF 156 173

Links

Other CCHC ZF family RBPs
Other Cavia porcellus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CNBP Procavia capensis ENSPCAG00000011572 N 1.000
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 1.000
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 1.000
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 1.000
CNBP Monodelphis domestica ENSMODG00000008362 N 1.000
Cnbp Mus musculus ENSMUSG00000030057 N 1.000
CNBP Pan troglodytes ENSPTRG00000015369 N 1.000
CNBP Sorex araneus ENSSARG00000011874 N 1.000
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 1.000
CNBP Canis familiaris ENSCAFG00000004320 N 1.000
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 1.000
CNBP Tursiops truncatus ENSTTRG00000015266 N 1.000
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 1.000
CNBP Macaca mulatta ENSMMUG00000011585 N 1.000
CNBP Ochotona princeps ENSOPRG00000005487 N 1.000
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 1.000
CNBP Myotis lucifugus ENSMLUG00000012554 N 1.000
LOC100050146 Equus caballus ENSECAG00000009512 N 1.000
CNBP Felis catus ENSFCAG00000008665 N 1.000
CNBP Homo sapiens ENSG00000169714 N 1.000
CNBP Macropus eugenii ENSMEUG00000011699 N 1.000
CNBP Loxodonta africana ENSLAFG00000002502 N 1.000
Cnbp Dipodomys ordii ENSDORG00000002919 N 1.000
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.992
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.992
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.992
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.992
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.992
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.992
CNBP Vicugna pacos ENSVPAG00000007138 N 0.992
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.992
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.992
CNBP Anolis carolinensis ENSACAG00000013192 N 0.984
AAI69746 Xenopus laevis AAI69746 N 0.984
CAA69031 Xenopus laevis CAA69031 N 0.976
AAA81168 Xenopus laevis AAA81168 N 0.976
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.960
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.856
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.832
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.825
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.824
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.808
cnbp Danio rerio ENSDARG00000070922 N 0.784
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.784
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.776
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.776
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.768
zff9 Danio rerio ENSDARG00000045776 N 0.754
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.738
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.722