CNBP (Pteropus vampyrus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSPVAG00000015070 T10443_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000014204 CCHC ZF 4 21
ENSPVAP00000014204 CCHC ZF 52 68
ENSPVAP00000014204 CCHC ZF 72 89
ENSPVAP00000014204 CCHC ZF 96 113
ENSPVAP00000014204 CCHC ZF 117 134
ENSPVAP00000014204 CCHC ZF 135 152
ENSPVAP00000014204 CCHC ZF 157 174

Links

Other CCHC ZF family RBPs
Other Pteropus vampyrus RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100050146 Equus caballus ENSECAG00000009512 N 0.960
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.960
CNBP Felis catus ENSFCAG00000008665 N 0.960
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.960
CNBP Ochotona princeps ENSOPRG00000005487 N 0.960
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.960
CNBP Procavia capensis ENSPCAG00000011572 N 0.960
CNBP Homo sapiens ENSG00000169714 N 0.960
CNBP Loxodonta africana ENSLAFG00000002502 N 0.960
Cnbp Mus musculus ENSMUSG00000030057 N 0.960
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.960
CNBP Monodelphis domestica ENSMODG00000008362 N 0.960
CNBP Macaca mulatta ENSMMUG00000011585 N 0.960
CNBP Macropus eugenii ENSMEUG00000011699 N 0.960
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.960
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.960
CNBP Cavia porcellus ENSCPOG00000012816 N 0.960
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.960
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.960
CNBP Sorex araneus ENSSARG00000011874 N 0.960
CNBP Pan troglodytes ENSPTRG00000015369 N 0.960
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.960
CNBP Canis familiaris ENSCAFG00000004320 N 0.960
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.960
CNBP Vicugna pacos ENSVPAG00000007138 N 0.952
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.952
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.952
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.952
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.952
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.952
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.952
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.952
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.952
CNBP Anolis carolinensis ENSACAG00000013192 N 0.944
AAI69746 Xenopus laevis AAI69746 N 0.944
CAA69031 Xenopus laevis CAA69031 N 0.936
AAA81168 Xenopus laevis AAA81168 N 0.936
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.816
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.808
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.786
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.784
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.776
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.752
cnbp Danio rerio ENSDARG00000070922 N 0.752
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.744
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.736
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.736
zff9 Danio rerio ENSDARG00000045776 N 0.722
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.714