AAA81168 (Xenopus laevis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 AAA81168 T16437_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAA81168 CCHC ZF 4 21
AAA81168 CCHC ZF 43 59
AAA81168 CCHC ZF 63 80
AAA81168 CCHC ZF 87 104
AAA81168 CCHC ZF 109 125
AAA81168 CCHC ZF 126 143
AAA81168 CCHC ZF 147 164

Links

Other CCHC ZF family RBPs
Other Xenopus laevis RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI69746 Xenopus laevis AAI69746 N 0.992
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.984
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.984
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.984
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.976
Cnbp Mus musculus ENSMUSG00000030057 N 0.976
CNBP Monodelphis domestica ENSMODG00000008362 N 0.976
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.976
CNBP Loxodonta africana ENSLAFG00000002502 N 0.976
CNBP Macropus eugenii ENSMEUG00000011699 N 0.976
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.976
CNBP Procavia capensis ENSPCAG00000011572 N 0.976
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.976
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.976
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.976
CNBP Sorex araneus ENSSARG00000011874 N 0.976
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.976
CNBP Pan troglodytes ENSPTRG00000015369 N 0.976
CNBP Ochotona princeps ENSOPRG00000005487 N 0.976
CNBP Macaca mulatta ENSMMUG00000011585 N 0.976
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.976
CNBP Cavia porcellus ENSCPOG00000012816 N 0.976
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.976
CNBP Anolis carolinensis ENSACAG00000013192 N 0.976
LOC100050146 Equus caballus ENSECAG00000009512 N 0.976
CNBP Felis catus ENSFCAG00000008665 N 0.976
CNBP Homo sapiens ENSG00000169714 N 0.976
CNBP Canis familiaris ENSCAFG00000004320 N 0.976
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.976
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.968
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.968
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.968
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.968
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.968
CNBP Vicugna pacos ENSVPAG00000007138 N 0.968
CAA69031 Xenopus laevis CAA69031 N 0.952
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.936
ZCCHC13 Sus scrofa ENSSSCG00000012417 N 0.832
ENSETEG00000001978 Echinops telfairi ENSETEG00000001978 N 0.808
ENSCHOG00000003279 Choloepus hoffmanni ENSCHOG00000003279 N 0.808
ZCCHC13 Oryctolagus cuniculus ENSOCUG00000008008 N 0.802
Zcchc13 Mus musculus ENSMUSG00000031330 N 0.784
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.776
cnbp Danio rerio ENSDARG00000070922 N 0.776
Ame_R012991 Ailuropoda melanoleuca Ame_R012991 N 0.760
ENSDORG00000019854 Dipodomys ordii ENSDORG00000019854 N 0.760
ZCCHC13 Cavia porcellus ENSCPOG00000004667 N 0.760
zff9 Danio rerio ENSDARG00000045776 N 0.730
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.722
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.714