LOC_Os04g07360 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g07360 T11154_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g07360.1 CCHC ZF 100 117
LOC_Os04g07360.1 CCHC ZF 201 218
LOC_Os04g07360.1 CCHC ZF 237 253
LOC_Os04g07360.1 CCHC ZF 309 326
LOC_Os04g07360.1 CCHC ZF 421 438

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s9216g3t1 Acyrtosiphon pisum DGIL_AUG5s9216g3t1 N 0.000
LOC_Os01g28490 Oryza sativa LOC_Os01g28490 N 0.000
LOC_Os01g70540 Oryza sativa LOC_Os01g70540 N 0.000
LOC_Os03g30810 Oryza sativa LOC_Os03g30810 N 0.000
LOC_Os04g12000 Oryza sativa LOC_Os04g12000 N 0.000
LOC_Os04g18244 Oryza sativa LOC_Os04g18244 N 0.000
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.000
LOC_Os05g03600 Oryza sativa LOC_Os05g03600 N 0.000
LOC_Os05g48170 Oryza sativa LOC_Os05g48170 N 0.000
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.000
LOC_Os08g28530 Oryza sativa LOC_Os08g28530 N 0.000
LOC_Os08g29980 Oryza sativa LOC_Os08g29980 N 0.000
LOC_Os09g16100 Oryza sativa LOC_Os09g16100 N 0.000
LOC_Os10g07460 Oryza sativa LOC_Os10g07460 N 0.000
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.000
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.000
LOC_Os11g35590 Oryza sativa LOC_Os11g35590 N 0.000
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.000
LOC_Os12g07910 Oryza sativa LOC_Os12g07910 N 0.000
dct-10 Caenorhabditis elegans Y38H6C.5 N 0.000