LOC_Os12g33660 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g33660 T12629_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g33660.1 CCHC ZF 211 228
LOC_Os12g33660.1 CCHC ZF 312 329
LOC_Os12g33660.1 CCHC ZF 348 364
LOC_Os12g33660.1 CCHC ZF 420 437
LOC_Os12g33660.1 CCHC ZF 532 549

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os06g18049 Oryza sativa LOC_Os06g18049 N 0.978
LOC_Os01g35670 Oryza sativa LOC_Os01g35670 N 0.978
LOC_Os04g07360 Oryza sativa LOC_Os04g07360 N 0.978
LOC_Os04g05890 Oryza sativa LOC_Os04g05890 N 0.978
LOC_Os06g18058 Oryza sativa LOC_Os06g18058 N 0.978
LOC_Os07g45700 Oryza sativa LOC_Os07g45700 N 0.978
LOC_Os02g12990 Oryza sativa LOC_Os02g12990 N 0.978
LOC_Os09g01840 Oryza sativa LOC_Os09g01840 N 0.978
LOC_Os09g01830 Oryza sativa LOC_Os09g01830 N 0.978
LOC_Os04g07070 Oryza sativa LOC_Os04g07070 N 0.966
LOC_Os06g17680 Oryza sativa LOC_Os06g17680 N 0.966
LOC_Os03g33182 Oryza sativa LOC_Os03g33182 N 0.966
LOC_Os03g33172 Oryza sativa LOC_Os03g33172 N 0.966
LOC_Os06g17640 Oryza sativa LOC_Os06g17640 N 0.955
LOC_Os05g23170 Oryza sativa LOC_Os05g23170 N 0.955
LOC_Os02g16370 Oryza sativa LOC_Os02g16370 N 0.955
LOC_Os04g28920 Oryza sativa LOC_Os04g28920 N 0.955
LOC_Os08g27910 Oryza sativa LOC_Os08g27910 N 0.955
LOC_Os09g09120 Oryza sativa LOC_Os09g09120 N 0.955
LOC_Os06g17190 Oryza sativa LOC_Os06g17190 N 0.944
LOC_Os04g29160 Oryza sativa LOC_Os04g29160 N 0.944
LOC_Os10g31580 Oryza sativa LOC_Os10g31580 N 0.944
LOC_Os08g20330 Oryza sativa LOC_Os08g20330 N 0.944
LOC_Os06g37120 Oryza sativa LOC_Os06g37120 N 0.910
LOC_Os06g17780 Oryza sativa LOC_Os06g17780 N 0.910
LOC_Os07g17650 Oryza sativa LOC_Os07g17650 N 0.899
LOC_Os10g20050 Oryza sativa LOC_Os10g20050 N 0.888
LOC_Os12g15850 Oryza sativa LOC_Os12g15850 N 0.876
LOC_Os02g16970 Oryza sativa LOC_Os02g16970 N 0.876
LOC_Os03g35670 Oryza sativa LOC_Os03g35670 N 0.876
LOC_Os10g01008 Oryza sativa LOC_Os10g01008 N 0.876
LOC_Os03g23070 Oryza sativa LOC_Os03g23070 N 0.876
LOC_Os04g55340 Oryza sativa LOC_Os04g55340 N 0.865
LOC_Os03g29120 Oryza sativa LOC_Os03g29120 N 0.865
LOC_Os09g14220 Oryza sativa LOC_Os09g14220 N 0.843
LOC_Os10g12800 Oryza sativa LOC_Os10g12800 N 0.843
LOC_Os08g11080 Oryza sativa LOC_Os08g11080 N 0.831
LOC_Os07g47890 Oryza sativa LOC_Os07g47890 N 0.820
LOC_Os05g09100 Oryza sativa LOC_Os05g09100 N 0.753