LOC_Os06g37120 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g37120 T11688_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g37120.1 CCHC ZF 100 114
LOC_Os06g37120.1 CCHC ZF 191 208
LOC_Os06g37120.1 CCHC ZF 227 243
LOC_Os06g37120.1 CCHC ZF 299 316
LOC_Os06g37120.1 CCHC ZF 411 428

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os09g01830 Oryza sativa LOC_Os09g01830 N 0.933
LOC_Os09g01840 Oryza sativa LOC_Os09g01840 N 0.933
LOC_Os01g35670 Oryza sativa LOC_Os01g35670 N 0.933
LOC_Os04g05890 Oryza sativa LOC_Os04g05890 N 0.933
LOC_Os05g23170 Oryza sativa LOC_Os05g23170 N 0.933
LOC_Os04g07360 Oryza sativa LOC_Os04g07360 N 0.933
LOC_Os07g45700 Oryza sativa LOC_Os07g45700 N 0.933
LOC_Os02g12990 Oryza sativa LOC_Os02g12990 N 0.933
LOC_Os06g18058 Oryza sativa LOC_Os06g18058 N 0.933
LOC_Os06g18049 Oryza sativa LOC_Os06g18049 N 0.933
LOC_Os10g31580 Oryza sativa LOC_Os10g31580 N 0.921
LOC_Os03g33172 Oryza sativa LOC_Os03g33172 N 0.921
LOC_Os09g09120 Oryza sativa LOC_Os09g09120 N 0.921
LOC_Os04g07070 Oryza sativa LOC_Os04g07070 N 0.921
LOC_Os06g17680 Oryza sativa LOC_Os06g17680 N 0.921
LOC_Os03g33182 Oryza sativa LOC_Os03g33182 N 0.921
LOC_Os04g28920 Oryza sativa LOC_Os04g28920 N 0.910
LOC_Os02g16370 Oryza sativa LOC_Os02g16370 N 0.910
LOC_Os06g17640 Oryza sativa LOC_Os06g17640 N 0.910
LOC_Os08g27910 Oryza sativa LOC_Os08g27910 N 0.910
LOC_Os12g33660 Oryza sativa LOC_Os12g33660 N 0.910
LOC_Os06g17190 Oryza sativa LOC_Os06g17190 N 0.899
LOC_Os08g20330 Oryza sativa LOC_Os08g20330 N 0.899
LOC_Os04g29160 Oryza sativa LOC_Os04g29160 N 0.899
LOC_Os02g16970 Oryza sativa LOC_Os02g16970 N 0.876
LOC_Os10g01008 Oryza sativa LOC_Os10g01008 N 0.876
LOC_Os12g15850 Oryza sativa LOC_Os12g15850 N 0.876
LOC_Os03g35670 Oryza sativa LOC_Os03g35670 N 0.876
LOC_Os06g17780 Oryza sativa LOC_Os06g17780 N 0.865
LOC_Os03g29120 Oryza sativa LOC_Os03g29120 N 0.865
LOC_Os10g20050 Oryza sativa LOC_Os10g20050 N 0.865
LOC_Os04g55340 Oryza sativa LOC_Os04g55340 N 0.865
LOC_Os03g23070 Oryza sativa LOC_Os03g23070 N 0.854
LOC_Os07g17650 Oryza sativa LOC_Os07g17650 N 0.854
LOC_Os10g12800 Oryza sativa LOC_Os10g12800 N 0.831
LOC_Os08g11080 Oryza sativa LOC_Os08g11080 N 0.820
LOC_Os07g47890 Oryza sativa LOC_Os07g47890 N 0.809
LOC_Os09g14220 Oryza sativa LOC_Os09g14220 N 0.809
LOC_Os05g09100 Oryza sativa LOC_Os05g09100 N 0.750