CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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14548_YKL059C
(
Saccharomyces bayanus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
14548_YKL059C
T15173_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
14548_YKL059C
CCHC ZF
182
197
CYRCGGRDHWIKNCPT
Links
Other
CCHC ZF
family RBPs
Other
Saccharomyces bayanus
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.225680
Amphimedon queenslandica
Aqu1.225680
N
0.000
Bm1_37725
Brugia malayi
Bm1_37725
N
0.000
DGIL_AUG5s17350g1t1
Acyrtosiphon pisum
DGIL_AUG5s17350g1t1
N
0.000
ENSCSAVG00000004843
Ciona savignyi
ENSCSAVG00000004843
N
0.000
UNK
Erinaceus europaeus
ENSEEUG00000013779
N
0.000
UNK
Microcebus murinus
ENSMICG00000007591
N
0.000
UNK
Otolemur garnettii
ENSOGAG00000001922
N
0.000
UNK
Oryzias latipes
ENSORLG00000018637
N
0.000
XR_022366.1
Pan troglodytes
ENSPTRG00000007591
N
0.000
UNKL
Takifugu rubripes
ENSTRUG00000012086
N
0.000
e_gw.10.245.1
Nematostella vectensis
e_gw.10.245.1
N
0.000
GK12832
Drosophila willistoni
FBgn0214841
N
0.000
fgenesh2_pg.scaffold_5000153
Branchiostoma floridae
fgenesh2_pg.scaffold_5000153
N
0.000
LOAG_04272
Loa loa
LOAG_04272
N
0.000
Sjc_0008870
Schistosoma japonicum
Sjc_0008870
N
0.000
Smp_154250
Schistosoma mansoni
Smp_154250
N
0.000
WUBG_00870
Wuchereria bancrofti
WUBG_00870
N
0.000
XP_001180099.1
Strongylocentrotus purpuratus
XP_001180099.1
N
0.000
XP_789013.2
Strongylocentrotus purpuratus
XP_789013.2
N
0.000