BGIOSIBCE004530 (Oryza indica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BGIOSIBCE004530 T18122_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE004530 KH 141 200

Links

Other KH family RBPs
Other Oryza indica RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.817
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.800
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.726
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.892
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.902
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.800
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.800
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.831
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.750
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.750
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.750
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.721
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.708
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.833
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.783
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.770
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.717
e_gw1.35.311.1 Selaginella moellendorfii e_gw1.35.311.1 N 0.700
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.817
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.770
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.726
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.937
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.852
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 1.000
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.892
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.850
mgf006761m Mimulus guttatus mgf006761m N 0.721
SB03G042090 Sorghum bicolor Sb03g042090 N 0.967