CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GA18453-RA
(
Drosophila pseudoobscura
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0078455
T19815_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0277622
KH
118
201
SQRVLVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRNSKDPKYAHLNSDLHVEISTIAPPAEA
Links
Other
KH
family RBPs
Other
Drosophila pseudoobscura
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL009694
Aedes aegypti
AAEL009694
N
0.739
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.786
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.750
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.724
qkr54B
Drosophila melanogaster
FBgn0022987
N
0.988
CG10384
Drosophila melanogaster
FBgn0034731
N
0.705
GA19155-RA
Drosophila pseudoobscura
FBgn0079152
N
0.702
GF11890
Drosophila ananassae
FBgn0088930
N
0.702
GF11894
Drosophila ananassae
FBgn0088934
N
0.716
GF13124
Drosophila ananassae
FBgn0090157
N
0.988
GG20683
Drosophila erecta
FBgn0112870
N
0.988
GG21049
Drosophila erecta
FBgn0113232
N
0.705
GG22189
Drosophila erecta
FBgn0114363
N
0.702
GH21366
Drosophila grimshawi
FBgn0128828
N
0.702
GH21368
Drosophila grimshawi
FBgn0128830
N
0.716
GH21401
Drosophila grimshawi
FBgn0128863
N
0.965
GI18580
Drosophila mojavensis
FBgn0141319
N
0.965
GI20561
Drosophila mojavensis
FBgn0143297
N
0.702
GI20563
Drosophila mojavensis
FBgn0143299
N
0.705
GL11428
Drosophila persimilis
FBgn0149037
N
1.000
GL17545
Drosophila persimilis
FBgn0155148
N
0.702
GM15914
Drosophila sechellia
FBgn0170830
N
0.705
GM21780
Drosophila sechellia
FBgn0176658
N
0.988
GD11271
Drosophila simulans
FBgn0183021
N
0.988
GJ19910
Drosophila virilis
FBgn0207052
N
0.716
GJ20374
Drosophila virilis
FBgn0207514
N
0.965
GJ22415
Drosophila virilis
FBgn0209527
N
0.702
GK17902
Drosophila willistoni
FBgn0219901
N
0.716
GK20819
Drosophila willistoni
FBgn0222815
N
0.713
GK22901
Drosophila willistoni
FBgn0224863
N
0.976
GE11667
Drosophila yakuba
FBgn0229463
N
0.988
GE13991
Drosophila yakuba
FBgn0231623
N
0.705
GE14183
Drosophila yakuba
FBgn0231805
N
0.702
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.759